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PLM3_127_b2_sep16_scaffold_711

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_711_1
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(1..1968)
DNA (1968bp) protein (656aa)
aconitate hydratase 1 (EC:4.2.1.3); K01681 aconitate hydratase 1 [EC:4.2.1.3] bin=bin1_lowGC species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin1_lowGC organism_group=Unknown_CP
acnA; aconitate hydratase 1
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_711_2
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(2323..3564)
DNA (1242bp) protein (414aa)
beta-ketoacyl-acyl-carrier-protein synthase II bin=bin1_lowGC species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
3-oxoacyl-ACP synthase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_711_3
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(3564..3815)
DNA (252bp) protein (84aa)
putative acyl carrier protein bin=bin1_lowGC species=Desulfovibrio gigas genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
acpP; acyl carrier protein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_711_4
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(3839..4516)
DNA (678bp) protein (226aa)
3-oxoacyl-(acyl-carrier-protein) reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] bin=bin1_lowGC species=Selenomonas sp. FOBRC9 genus=Selenomonas taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
fabG; 3-oxoacyl-ACP reductase (EC:1.1.1.100)
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_711_5
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(4572..5504)
DNA (933bp) protein (311aa)
fabD; malonyl CoA-ACP transacylase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] bin=bin1_lowGC species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
fabD; malonyl-CoA--acyl carrier protein transacylase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_711_6
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists


comp(5515..5697)
DNA (183bp) protein (61aa)
50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
LSU ribosomal protein L32P
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_711_7
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(5714..6229)
DNA (516bp) protein (172aa)
zinc finger protein; K07040 uncharacterized protein bin=bin1_lowGC species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_711_8
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(6305..7273)
DNA (969bp) protein (323aa)
oligopeptide/dipeptide ABC transporter ATPase; K02032 peptide/nickel transport system ATP-binding protein bin=bin1_lowGC species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
oligopeptide/dipeptide ABC transporter ATPase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_711_9
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(7274..8257)
DNA (984bp) protein (328aa)
oligopeptide ABC transporter ATP-binding protein; K02031 peptide/nickel transport system ATP-binding protein bin=bin1_lowGC species=Clostridium ultunense genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
oligopeptide/dipeptide ABC transporter ATPase
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_711_10
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(8294..9235)
DNA (942bp) protein (314aa)
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
binding-protein-dependent transport system inner membrane protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_711_11
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(9283..10284)
DNA (1002bp) protein (334aa)
binding-protein-dependent transport system inner membrane protein; K13894 microcin C transport system permease protein bin=bin1_lowGC species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
binding-protein-dependent transport system inner membrane protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_711_12
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(10355..12007)
DNA (1653bp) protein (551aa)
extracellular solute-binding protein bin=bin1_lowGC species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
extracellular solute-binding protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_711_13
R_Deltaproteobacteria_40_11, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12494..12742)
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=Bdellovibrio exovorus JSS RepID=M4V4L2_9DELT
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_40_11_curated
PLM3_127_b2_sep16_scaffold_711_14
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(13327..14073)
DNA (747bp) protein (249aa)
membrane protease subunit, stomatin/prohibitin bin=bin1_lowGC species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
membrane protease subunit, stomatin/prohibitin
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_711_15
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(14098..14604)
DNA (507bp) protein (169aa)
membrane-bound serine protease (ClpP class) bin=bin1_lowGC species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
serine protease
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_711_16
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(14652..15365)
DNA (714bp) protein (238aa)
membrane-bound serine protease (ClpP class) bin=bin1_lowGC species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
membrane-bound serine protease
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_711_17
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

15504..16139
DNA (636bp) protein (212aa)
outer membrane assembly lipoprotein YfiO; K05807 putative lipoprotein bin=bin1_lowGC species=Methylobacterium nodulans genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_711_18
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

16278..16637
DNA (360bp) protein (120aa)
hypothetical protein; K07090 bin=bin1_lowGC species=unknown genus=Krokinobacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_711_19
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(16748..17674)
DNA (927bp) protein (309aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75); K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] bin=bin1_lowGC species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_711_20
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(17713..19830)
DNA (2118bp) protein (706aa)
pnp; polyribonucleotide nucleotidyltransferase; K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] bin=bin1_lowGC species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
pnp; polyribonucleotide nucleotidyltransferase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_711_21
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists


comp(19852..20121)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=RS15_SYNJB
rpsO; 30S ribosomal protein S15
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_711_22
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(20196..21107)
DNA (912bp) protein (304aa)
tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] bin=bin1_lowGC species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
tRNA pseudouridine synthase B
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_711_23
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(21104..22093)
DNA (990bp) protein (330aa)
phosphoesterase RecJ domain-containing protein; K06881 phosphoesterase RecJ domain-containing protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
phosphoesterase
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_711_24
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(22086..22400)
DNA (315bp) protein (105aa)
rbfA; ribosome-binding factor A; K02834 ribosome-binding factor A bin=bin1_lowGC species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
rbfA; ribosome-binding factor A
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_711_25
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(22449..22739)
DNA (291bp) protein (97aa)
hypothetical protein; K09764 hypothetical protein bin=bin1_lowGC species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_711_26
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(22750..25344)
DNA (2595bp) protein (865aa)
translation initiation factor IF-2; K02519 translation initiation factor IF-2 bin=bin1_lowGC species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin1_lowGC organism_group=Unknown_CP
translation initiation factor if-2
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_711_27
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

comp(25446..26744)
DNA (1299bp) protein (433aa)
NusA antitermination factor; K02600 N utilization substance protein A bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
nusA; transcription elongation factor NusA
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_127_b2_sep16_scaffold_711_28

Not on your lists

comp(26755..27210)
DNA (456bp) protein (152aa)
Marine sediment metagenome DNA, contig: S01H4_L04222 {ECO:0000313|EMBL:GAG83396.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein; K09748 ribosome maturation factor RimP bin=bin1_lowGC species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
PLM3_127_b2_sep16_scaffold_711_29
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(27419..29473)
DNA (2055bp) protein (685aa)
transglutaminase bin=bin1_lowGC species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
transglutaminase
Tax=CSP1_2_Dadabacteria
PLM3_127_b2_sep16_scaffold_711_30
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(29470..31479)
DNA (2010bp) protein (670aa)
uvrB; excinuclease ABC subunit B; K03702 excinuclease ABC subunit B bin=bin1_lowGC species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
uvrB; excinuclease ABC subunit B
Tax=CSP1_2_Dadabacteria
Displaying items 1-30 of 40 in total

View Taxonomy