ggKbase home page

PLM3_127_b2_sep16_scaffold_1954_10

Organism: PLM3_127_b2_sep16_Dadabacteria_40_8

near complete RP 48 / 55 MC: 1 BSCG 49 / 51 ASCG 13 / 38
Location: comp(7822..8973)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 70 subunit, RpoD subfamily; K03086 RNA polymerase primary sigma factor bin=bin1_lowGC species=Oscillibacter sp. CAG:155 genus=Oscillibacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 381.0
  • Bit_score: 389
  • Evalue 3.70e-105
rpoD; RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 38.0
  • Coverage: 384.0
  • Bit_score: 238
  • Evalue 1.80e-60
Tax=CSP1_2_Dadabacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 54.3
  • Coverage: 381.0
  • Bit_score: 389
  • Evalue 5.20e-105

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_2_Dadabacteria → Dadabacteria → Bacteria

Sequences

DNA sequence
Length: 1152
ATGAAGAGAAAAGAGATAGATTTTAAAGGGTTCATACAAGAAGATGAAGAGTTCCTTTCATTGCCAGACAACGTAGATACACTTGCGCTCGACATGGTAGAGCCAATATCTGAGATTGAACCTGAAGAACAAGAGTCCACAAACGGAAAAAACGGTCGATTCTTGTATGATCAATTCAGACTGCTCTATCCTTATTTTAGCGATATGTCACATGAACCTCTTCTAACCAAAAAGGGTGAGATAGAGATTTCAGCAAAAATAAAGAAGTGCGAGGAAAAAACAGGGGAAATAAAGGCAATACTAGAGAGGCTTCTAGCAGAAAAAGATACTAAAAGTAAAAGGGATGGAAATCGAATAGCAAGGGAGAAAAGGCTATCAAGGCAAAATAATATACTCAACGCTTTAATGAAGGCATACTCAGGCACAGGAAGTAGACTAAAAGAAAGGTTTATAAAAGCGAACTTAAGATTGGTTGTAAGTATTGCAAAAAGGCATGTAAATATGGGATTAGCGTTTGCGGATCTTATTCAGGAGGGCAATTTAGGTTTGATGAGAGCAGTAGACAGATTTGATCACAAAAAGGGATGTAAATTTTCAACGTACTCCGTATGGTGGATACTCCAAGCTCTTAGTAGGTCTCTTATGGATCGGACACGGACTATAAAAATACCAGTATATCTGCAAGAGCAGACAAGCAAAGTATTCAATGTAATTTCAATGCTTCATAAGGAGTTGGGAAGAAAGCCTATACTAGAAGAGATTGCAAAAAAATTAAATTATTCTGTCAAGTTTGTGCAATTGGTTTTGAATGCGGAAAAAGAGGTTATAAGTCTAGACTCTCCCATACAAGAAGGAGACCAAAAAACCTACCTCGATTTAATTGCGGATGAGGCAATACCCTCACCGGATTCTTTATCGGATGATGAAAAACTTAAAGGACAAATTAGTCAAGCTTTATCACTACTCACTCCGAGAGAACAAGAGATAATAAGGTTGAGGTATGGGATAGATCAGGAGGATATATTTACATTAGATGTGGTTGGAAAGATGTACGGTCTGACACGTGAGCGCATAAGGCAGATTGAGAAAGCTGCACTTGGGAAGATCGCAAAATCGGACATGGGAGAAATATTAGAGAGCTTTTTAAGATAA
PROTEIN sequence
Length: 384
MKRKEIDFKGFIQEDEEFLSLPDNVDTLALDMVEPISEIEPEEQESTNGKNGRFLYDQFRLLYPYFSDMSHEPLLTKKGEIEISAKIKKCEEKTGEIKAILERLLAEKDTKSKRDGNRIAREKRLSRQNNILNALMKAYSGTGSRLKERFIKANLRLVVSIAKRHVNMGLAFADLIQEGNLGLMRAVDRFDHKKGCKFSTYSVWWILQALSRSLMDRTRTIKIPVYLQEQTSKVFNVISMLHKELGRKPILEEIAKKLNYSVKFVQLVLNAEKEVISLDSPIQEGDQKTYLDLIADEAIPSPDSLSDDEKLKGQISQALSLLTPREQEIIRLRYGIDQEDIFTLDVVGKMYGLTRERIRQIEKAALGKIAKSDMGEILESFLR*