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PLM3_127_b2_sep16_scaffold_513

Search features with annotation key words

Displaying items 31-60 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_513_30
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28767..29375
DNA (609bp) protein (203aa)
guanylate kinase (EC:2.7.4.8)
hypothetical protein Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI000379B0D3
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3_127_b2_sep16_scaffold_513_31
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29383..29586
DNA (204bp) protein (68aa)
DNA-directed RNA polymerase subunit omega Tax=Methyloversatilis universalis RepID=UPI000373F81F
DNA-directed RNA polymerase subunit omega
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_127_b2_sep16_scaffold_513_32
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29690..31798
DNA (2109bp) protein (703aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(P)ppGpp synthetase I SpoT/RelA Tax=Sulfuricella denitrificans skB26 RepID=S6AIK6_9PROT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_513_33
unknown

Not on your lists

31897..32184
DNA (288bp) protein (96aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_513_34
unknown

Not on your lists

32428..32808
DNA (381bp) protein (127aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_513_35
Bacillus thermotolerans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(33432..34277)
DNA (846bp) protein (282aa)
hypothetical protein Tax=Brevibacillus sp. phR RepID=UPI000314A182
Fumarylacetoacetate hydrolase family protein {ECO:0000313|EMBL:KKB34285.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus thermotolerans.;"
fumarylacetoacetate (FAA) hydrolase
PLM3_127_b2_sep16_scaffold_513_36
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34359..35192)
DNA (834bp) protein (278aa)
UPI0003CFA00C related cluster Tax=unknown RepID=UPI0003CFA00C
Uncharacterized protein {ECO:0000313|EMBL:ESZ03741.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
methyltransferase type 11
PLM3_127_b2_sep16_scaffold_513_37
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35400..35966
DNA (567bp) protein (189aa)
Cytochrome c class I Tax=Burkholderia sp. SJ98 RepID=K8QYX2_9BURK
Cytochrome C {ECO:0000313|EMBL:KAK46621.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
cytochrome c class I
PLM3_127_b2_sep16_scaffold_513_trna_3
unknown

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comp(36032..36104)
DNA (73bp)
transferRNA Lys
PLM3_127_b2_sep16_scaffold_513_38
unknown

Not on your lists

36453..36743
DNA (291bp) protein (97aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_513_trna_2
unknown

Not on your lists

comp(36903..36983)
DNA (81bp)
transferRNA Lys
PLM3_127_b2_sep16_scaffold_513_39
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37074..38231)
DNA (1158bp) protein (386aa)
Putative uncharacterized protein Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CSJ2_SIDLE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_513_40
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38385..39449)
DNA (1065bp) protein (355aa)
Secreted protein containing Tol-Pal system, YbgF domain protein Tax=mine drainage metagenome RepID=T0ZDM0_9ZZZZ
tol-pal system protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_513_41
R_Methylophilales_57_10, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39532..40179)
DNA (648bp) protein (216aa)
hypothetical protein Tax=Uliginosibacterium gangwonense RepID=UPI000370D827
peptidoglycan-associated lipoprotein
Tax=RIFCSPHIGHO2_02_FULL_Methylophilales_57_10_curated
PLM3_127_b2_sep16_scaffold_513_42
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40183..41514)
DNA (1332bp) protein (444aa)
Protein TolB Tax=Sulfuricella denitrificans skB26 RepID=S6ABB2_9PROT
tolB; translocation protein TolB
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_513_43
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41544..42476)
DNA (933bp) protein (311aa)
Cell division and transport-associated protein TolA Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5G9_NITMU
TonB-like protein
Cell division and transport-associated protein TolA {ECO:0000313|EMBL:ABB76002.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
PLM3_127_b2_sep16_scaffold_513_44
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42479..42895)
DNA (417bp) protein (139aa)
Protein TolR Tax=Sulfuricella denitrificans skB26 RepID=S6AF68_9PROT
protein TolR
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3_127_b2_sep16_scaffold_513_45
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42902..43606)
DNA (705bp) protein (235aa)
MotA/TolQ/ExbB proton channel family protein Tax=Nitrosospira sp. APG3 RepID=M5DHC8_9PROT
MotA/TolQ/ExbB proton channel family protein {ECO:0000313|EMBL:CCU61882.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
MotA/TolQ/ExbB proton channel
PLM3_127_b2_sep16_scaffold_513_46
RifOxyB12_full_Sideroxydans_59_6_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43688..44113)
DNA (426bp) protein (142aa)
4-hydroxybenzoyl-CoA thioesterase Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5G6_NITMU
4-hydroxybenzoyl-CoA thioesterase
Tax=RifOxyB12_full_Sideroxydans_59_6_curated
PLM3_127_b2_sep16_scaffold_513_47
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44126..45166)
DNA (1041bp) protein (347aa)
Holliday junction ATP-dependent DNA helicase RuvB Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GHQ0_NITSI
Holliday junction ATP-dependent DNA helicase ruvB
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3_127_b2_sep16_scaffold_513_48
unknown

Not on your lists

comp(45201..45359)
DNA (159bp) protein (53aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_513_49
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45533..46111)
DNA (579bp) protein (193aa)
Holliday junction ATP-dependent DNA helicase RuvA Tax=Aromatoleum aromaticum (strain EbN1) RepID=RUVA_AROAE
ATP-dependent DNA helicase RuvA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_513_50
R_Gallionellales_60_31, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46108..46629)
DNA (522bp) protein (174aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
Tax=RIFCSPLOWO2_02_Gallionellales_60_31_curated
PLM3_127_b2_sep16_scaffold_513_51
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46790..47515)
DNA (726bp) protein (242aa)
Probable transcriptional regulatory protein Nmul_A2722 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Y2722_NITMU
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3_127_b2_sep16_scaffold_513_52
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47772..48947
DNA (1176bp) protein (392aa)
Uncharacterized protein Tax=Pandoraea sp. RB-44 RepID=V5UCY5_9BURK
ATP-binding protein
ATP-binding protein {ECO:0000313|EMBL:KHQ99590.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
PLM3_127_b2_sep16_scaffold_513_53
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49041..49319
DNA (279bp) protein (93aa)
Uncharacterized transporter Tax=Azospirillum sp. (strain B510) RepID=D3P7A7_AZOS1
transporter
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_127_b2_sep16_scaffold_513_54
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49332..52484)
DNA (3153bp) protein (1051aa)
Putative uncharacterized protein bin=bin7_NC10_sister species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
PLM3_127_b2_sep16_scaffold_513_55
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52481..53143)
DNA (663bp) protein (221aa)
Tax=RBG_16_Gamma2_60_9_curated
PLM3_127_b2_sep16_scaffold_513_56
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53209..55665)
DNA (2457bp) protein (819aa)
hypothetical protein, partial Tax=Chitiniphilus shinanonensis RepID=UPI000372CC40
oprF5; OmpA domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
PLM3_127_b2_sep16_scaffold_513_57
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56050..56511)
DNA (462bp) protein (154aa)
Putative uncharacterized protein Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60A69_METCA
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
Displaying items 31-60 of 83 in total

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