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PLM3_127_b2_sep16_scaffold_848

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_848_1
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(125..556)
DNA (432bp) protein (144aa)
Uncharacterized protein Tax=Nitrococcus mobilis Nb-231 RepID=A4BSM5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR21295.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_848_2
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(553..786)
DNA (234bp) protein (78aa)
Uncharacterized protein Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YG37_THIV6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL75955.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
PLM3_127_b2_sep16_scaffold_848_3
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1300..3849)
DNA (2550bp) protein (850aa)
Periplasmic protein involved in polysaccharide export Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZBG1_TERRK
periplasmic protein involved in polysaccharide export
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
PLM3_127_b2_sep16_scaffold_848_4
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

4743..5033
DNA (291bp) protein (97aa)
hypothetical protein Tax=Methylosarcina fibrata RepID=UPI00036064DB
XRE family plasmid maintenance system antidote protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
PLM3_127_b2_sep16_scaffold_848_5
Pseudomonas sp. ES3-33, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5204..5611)
DNA (408bp) protein (136aa)
hypothetical protein Tax=Pseudomonas fluorescens RepID=UPI000371805D
DNA-binding protein {ECO:0000313|EMBL:KJH75272.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. ES3-33.;"
DNA-binding protein
PLM3_127_b2_sep16_scaffold_848_6
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5616..5855)
DNA (240bp) protein (80aa)
AbrB family transcriptional regulator Tax=Acidithiobacillus thiooxidans RepID=UPI00026249CA
sporulation regulator-like protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
PLM3_127_b2_sep16_scaffold_848_7
Chlorobium limicola, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(6100..6489)
DNA (390bp) protein (130aa)
hypothetical protein Tax=zeta proteobacterium SCGC AB-604-O16 RepID=UPI0003645A01
S23 ribosomal protein
S23 ribosomal protein {ECO:0000313|EMBL:ACD90936.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium limicola (strain DSM 245 / NBRC 103803).;"
PLM3_127_b2_sep16_scaffold_848_8
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6587..7237)
DNA (651bp) protein (217aa)
hypothetical protein Tax=Burkholderia sp. JPY347 RepID=UPI0003718C45
ankyrin
Tax=RBG_16_Gamma2_60_9_curated
PLM3_127_b2_sep16_scaffold_848_9
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7398..9125
DNA (1728bp) protein (576aa)
quinoprotein ethanol dehydrogenase Tax=Burkholderia kururiensis RepID=UPI00034C5FCB
Pyrrolo-quinoline quinone
Quinonprotein alcohol dehydrogenase {ECO:0000313|EMBL:KAK46620.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
PLM3_127_b2_sep16_scaffold_848_10
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9415..9999
DNA (585bp) protein (195aa)
Putative cytochrome c Tax=Burkholderia sp. RPE64 RepID=R4WZJ9_9BURK
Putative cytochrome c, associated with quino(Hemo)protein alcohol dehydrogenase {ECO:0000313|EMBL:CDS54227.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
putative cytochrome c
PLM3_127_b2_sep16_scaffold_848_11
unknown

Not on your lists

comp(10089..10196)
DNA (108bp) protein (36aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_848_12
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10216..11055
DNA (840bp) protein (280aa)
hydrolase (EC:3.-.-.-)
Hydrolase Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Y1R2_9RHOO
Hydrolase {ECO:0000313|EMBL:ENO88131.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
PLM3_127_b2_sep16_scaffold_848_13
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11292..11960
DNA (669bp) protein (223aa)
Dimethylmenaquinone methyltransferase Tax=Hoeflea phototrophica DFL-43 RepID=A9D058_9RHIZ
Demethylmenaquinone methyltransferase {ECO:0000313|EMBL:EDQ34931.2}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
hypothetical protein
PLM3_127_b2_sep16_scaffold_848_14
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12068..12838
DNA (771bp) protein (257aa)
2-keto-3-deoxy-galactonokinase Tax=Methylobacterium sp. WSM2598 RepID=UPI00037A6CA0
2-keto-3-deoxy-galactonokinase
2-keto-3-deoxy-galactonokinase {ECO:0000313|EMBL:ACA18960.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
PLM3_127_b2_sep16_scaffold_848_15
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12835..13476
DNA (642bp) protein (214aa)
KDPG and KHG aldolase Tax=alpha proteobacterium BAL199 RepID=A8U3I1_9PROT
KDPG and KHG aldolase {ECO:0000313|EMBL:EDP61301.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
2-dehydro-3-deoxy-6-phosphogalactonate aldolase
PLM3_127_b2_sep16_scaffold_848_16
unknown

Not on your lists

13671..13925
DNA (255bp) protein (85aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_848_17
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14058..15722)
DNA (1665bp) protein (555aa)
Acyl-CoA dehydrogenase Tax=Sorangium cellulosum So0157-2 RepID=S4XJJ4_SORCE
acyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_127_b2_sep16_scaffold_848_18
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15936..17414)
DNA (1479bp) protein (493aa)
Succinate-semialdehyde dehydrogenase I Tax=Oceanibaculum indicum P24 RepID=K2IXD1_9PROT
Succinate-semialdehyde dehydrogenase I {ECO:0000313|EMBL:EKE75111.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
putative glutarate-semialdehyde dehydrogenase
PLM3_127_b2_sep16_scaffold_848_19
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17486..17878)
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EXY3_9PROT
hypothetical protein
Tax=RBG_16_Gamma2_65_34_curated
PLM3_127_b2_sep16_scaffold_848_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17928..18707)
DNA (780bp) protein (260aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein Tax=Burkholderia gladioli (strain BSR3) RepID=F2LEU5_BURGS
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_127_b2_sep16_scaffold_848_21
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18873..19652
DNA (780bp) protein (260aa)
Surface lipoprotein-like protein Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G655_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHK79830.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
PLM3_127_b2_sep16_scaffold_848_22
unknown

Not on your lists

19961..20602
DNA (642bp) protein (214aa)

This feature has no annotations

PLM3_127_b2_sep16_scaffold_848_23
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20778..21683)
DNA (906bp) protein (302aa)
Uncharacterized protein Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AQI7_PELPD
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_127_b2_sep16_scaffold_848_24
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21937..22812)
DNA (876bp) protein (292aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM3_127_b2_sep16_scaffold_848_25
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22809..24110)
DNA (1302bp) protein (434aa)
ATP-dependent RNA helicase RhlE Tax=Nitrosospira sp. APG3 RepID=M5DLT4_9PROT
ATP-dependent RNA helicase RhlE {ECO:0000313|EMBL:CCU63648.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
DEAD/DEAH box helicase-like protein
Displaying 25 items

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