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PLM3_127_b2_sep16_scaffold_5946

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_127_b2_sep16_scaffold_5946_1
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..221
-----------------
DNA (219bp)
protein (73aa)
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source="Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 /; NCIMB 10441 / D) (Chromatium vinosum).;"
Histidine--tRNA ligase Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RSQ6_ALLVD
PLM3_127_b2_sep16_scaffold_5946_2
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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250..927
-----------------
DNA (678bp)
protein (226aa)
hypothetical protein Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00037FAD39
hypothetical protein
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:ACL73127.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
PLM3_127_b2_sep16_scaffold_5946_3
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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924..2090
-----------------
DNA (1167bp)
protein (389aa)
Outer membrane protein assembly factor BamB Tax=Beggiatoa alba B18LD RepID=I3CKX2_9GAMM
bamB; Outer membrane protein assembly factor BamB
Tax=BJP_IG2102_Gammaproteobacteria_62_140
PLM3_127_b2_sep16_scaffold_5946_4
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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2124..3494
-----------------
DNA (1371bp)
protein (457aa)
GTPase Der Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BXK7_9GAMM
GTP-binding protein EngA
Tax=BJP_IG2102_Gammaproteobacteria_62_140
PLM3_127_b2_sep16_scaffold_5946_5
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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3497..4591
-----------------
DNA (1095bp)
protein (365aa)
Homoserine O-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.31 {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070942};; Homoserine O-trans-acetylase {ECO:0000256|HAMAP-Rule:MF_00296}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM 16096.;"
homoserine O-acetyltransferase (EC:2.3.1.31)
Homoserine O-acetyltransferase Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KHP1_9GAMM
PLM3_127_b2_sep16_scaffold_5946_6
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4643..5203
-----------------
DNA (561bp)
protein (187aa)
Putative cysteine dioxygenase type I Tax=Rhodanobacter spathiphylli B39 RepID=I4W062_9GAMM
Cysteine dioxygenase {ECO:0000313|EMBL:KJV32037.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
putative metal-dependent enzyme of the double-stranded beta helix superfamily
PLM3_127_b2_sep16_scaffold_5946_7
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5206..6048)
-----------------
DNA (843bp)
protein (281aa)
Metalloendopeptidase-like membrane protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WNQ9_9BURK
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:EHR72595.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
peptidase M23
PLM3_127_b2_sep16_scaffold_5946_8
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6051..7424)
-----------------
DNA (1374bp)
protein (458aa)
exodeoxyribonuclease VII (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit Tax=Nitrococcus mobilis Nb-231 RepID=A4BV62_9GAMM
Tax=RBG_16_Gamma2_60_9_curated
PLM3_127_b2_sep16_scaffold_5946_9
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

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7931..9163
-----------------
DNA (1233bp)
protein (411aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.37)
inosine 5''''-monophosphate dehydrogenase Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036B540B
PLM3_127_b2_sep16_scaffold_5946_10
Pseudomonas sp. 1-7, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9386..9961
-----------------
DNA (576bp)
protein (192aa)
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 1-7.;"
GMP synthase [glutamine-hydrolyzing] Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7KAB3_PSEPS
Displaying 10 items

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