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PLM3_127_b2_sep16_scaffold_3298_18

Organism: PLM3_127_b2_sep16_Gammaproteobacteria_64_8

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: 22464..23069

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 40.8
  • Coverage: 184.0
  • Bit_score: 129
  • Evalue 3.60e-27
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 41.1
  • Coverage: 185.0
  • Bit_score: 117
  • Evalue 4.10e-24
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 45.5
  • Coverage: 202.0
  • Bit_score: 177
  • Evalue 1.30e-41

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Taxonomy

R_Gammaproteobacteria_56_15 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 606
ATGACGCGGATCACCGAGATCGAGCTCGAACCTGCTGTCCTGCGGGCAGCGCAGGCGGGCGATTCGCGGTCCCAGGCCGAGCTCTACCGCGCGTTTTCGCGAGCAACCTACGCGCTGATCCGCCGCCTGATTCCGCGCCCGGCAGTTGCCGATGATCTGTTCCAGGACACTTTCGTCGAAGTTCTCCAGAGCCTGCATGCGTTCCGTGGTGAGGCGCCGCTTGGCGCCTGGATCCGCCGTGTCGCGGTGAGCAAGTGCCTGATGCACCTGCGCTCGCCGTGGCATCGAAGCCTGATGTGGCTCGACCAGCTCGCGGGCGAGGACGCGATTCCCGGTACGGCCGCGATGCCGGTCCCGTGCGCCGACACGGACGCCGCGCTACAGATCGATCTGGAAGGCGCGCTGGCGCAGTTACCAGGTCGATCCCGCGCGGTGGTGTGGTTGTACGACGTCGAAGGCTACAGCCACGAGGAGATCGCGGCGCACTTCGGCAAGAGCGTGAGTTTTTCCAAGTCGCAGCTCATGCGCGCCCACCTGCGGTTGCGCGAGTTGCTCGAGGCAGAGCGGGAGAACGCGGCATGCATGCCAGTATCGACCAACTTTTGA
PROTEIN sequence
Length: 202
MTRITEIELEPAVLRAAQAGDSRSQAELYRAFSRATYALIRRLIPRPAVADDLFQDTFVEVLQSLHAFRGEAPLGAWIRRVAVSKCLMHLRSPWHRSLMWLDQLAGEDAIPGTAAMPVPCADTDAALQIDLEGALAQLPGRSRAVVWLYDVEGYSHEEIAAHFGKSVSFSKSQLMRAHLRLRELLEAERENAACMPVSTNF*