ggKbase home page

PLM1_100_b1_sep16_scaffold_1022

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_1022_1
unknown

Not on your lists

3..308
DNA (306bp) protein (102aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1022_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

704..1756
DNA (1053bp) protein (351aa)
Transporter, major facilitator family protein Tax=delta proteobacterium NaphS2 RepID=D8FB52_9DELT
narK; protein NarK
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_1022_3
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1802..2557
DNA (756bp) protein (252aa)
Silent information regulator protein Sir2 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXC6_PARL1
silent information regulator protein Sir2
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM1_100_b1_sep16_scaffold_1022_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2797..3801
DNA (1005bp) protein (335aa)
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase bin=GWA2_Methylomirabilis_73_35 species=Mycobacterium xenopi genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
amidohydrolase 2
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_1022_5
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3878..4252)
DNA (375bp) protein (125aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_100_b1_sep16_scaffold_1022_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4289..4669)
DNA (381bp) protein (127aa)
Uncharacterized protein Tax=Alicyclobacillus acidoterrestris ATCC 49025 RepID=T0BFZ5_9BACL
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_1022_7
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(4737..6239)
DNA (1503bp) protein (501aa)
putative RecB family nuclease; K06860 uncharacterized protein bin=bin3_NC10 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=bin3_NC10 organism_group=NC10
putative RecB family nuclease
Tax=CSP1_5_NC10
PLM1_100_b1_sep16_scaffold_1022_8
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6821..8431)
DNA (1611bp) protein (537aa)
Response regulator receiver protein Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) RepID=F2ULX6_SALR5
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_100_b1_sep16_scaffold_1022_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8733..9347
DNA (615bp) protein (205aa)
hypothetical protein Tax=Frankia sp. BMG5.12 RepID=UPI0003685059
EmrB/QacA subfamily drug resistance transporter
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_1022_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9742..10713
DNA (972bp) protein (324aa)
Aminocarboxymuconate-semialdehyde decarboxylase (Fragment) bin=GWD2_Deltaproteobacteria_55_8 species=Burkholderia sp. TJI49 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
amidohydrolase 2
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_1022_11
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10822..11385)
DNA (564bp) protein (188aa)
SpoIID/LytB domain protein bin=GWD2_Deltaproteobacteria_55_8 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM1_100_b1_sep16_scaffold_1022_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11494..11913)
DNA (420bp) protein (140aa)
Putative uncharacterized protein bin=GWD2_Chloroflexi_49_16 species=Desulfovibrio africanus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Chloroflexi_49_16 organism_group=Chloroflexi organism_desc=Good +
threonyl-tRNA synthetase editing domain protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_1022_13
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11926..12492)
DNA (567bp) protein (189aa)
Glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
pabA; para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_100_b1_sep16_scaffold_1022_14
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12489..13898)
DNA (1410bp) protein (470aa)
Fragment of Anthranilate synthase bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
trpE; anthranilate synthase, catalytic subunit
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Displaying 14 items

View Taxonomy