ggKbase home page

PLM1_100_b1_sep16_scaffold_5642_3

Organism: PLM1_100_b1_sep16_Deltaproteobacteria_55_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 650..1609

Top 3 Functional Annotations

Value Algorithm Source
Isocitrate dehydrogenase [NADP] bin=GWC2_Chloroflexi_49_37 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_49_37 organism_group=Chloroflexi organism_desc=Good +; Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 79.0
  • Coverage: 319.0
  • Bit_score: 528
  • Evalue 3.30e-147
isocitrate dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 63.0
  • Coverage: 319.0
  • Bit_score: 411
  • Evalue 1.30e-112
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.1
  • Coverage: 319.0
  • Bit_score: 571
  • Evalue 4.70e-160

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
ATGGTTGTCTTCCGCGAAAACACGGAGGATATCTACACAGGTATCGAATTTCCTAACGGTACCGAAGCCAACGCCAAATTCAAATCGCTCCTCAAAGAAACTTTTCCCAAGGAATTTGCCAAGATTCGCTTCCCAAACACGGCTGCCGTCGGGTTAAAGCCGGTCTCGGTCGAAGGTACCGAGCGACTGGTGCGCGCAGCGATTCAGTGGTCACTGGCGAACAAGCGCAAGAATATTAACTTCGTCCACAAGGGCAACATCATGAAGTACACCGAAGGTGCTTTTGCGGAGTGGGGTTACGCGCTGGCAAAGCGCGAATTTCGCAACGATGTCGTGACCGAGCGCGAGTCGTGGATCCTCGGCAACAAGGAAGCGAAGGCCAATATTTCCGTCGAAGACAACGCCAAGGCAATCGACCCCGGTTTCGACATGATGTCGCCTGCGCAGCAGAACGATATTAAGAAAGAAGTTGAAGAGGCGCTCAAGCTTTGGCCAACCCATGGCGACGGCAAGTGGAAGTCCAAGCTTATGCTCAAAGATTCCATCGCCGACGTCACATTGCAGTTCGTGCTCATCAGGCCGAAGGATTACGATGTCATCGCGACCATGAACCTGAACGGCGATTATTTGTCCGACGCGTTAGCGGCGCAGGTCGGCGGTATCGGCATCGCGCCGGGCGCGAATATCAACTATGACTCTGGCCACGCGGTTTTCGAGGCAACCCACGGAACGGCGCCGAAATACGCCGACCTCGACAAGGTCAATCCCGGTTCGGTGATTCTGTCCGGCGAGATGATGCTGCGCTATATGGGCTGGTTGGAGGCTGCCGATCTCATCATCAAAGGCATCGAGGGTGCCGTCAACGCCAAGACCGTGACTTATGATTTCGAGCGCCTCATGCCCGGCGCCAAGTTAGTGAGCTGTTCCGGATTCGGCGATGCGATAATCGCGAATATGTGA
PROTEIN sequence
Length: 320
MVVFRENTEDIYTGIEFPNGTEANAKFKSLLKETFPKEFAKIRFPNTAAVGLKPVSVEGTERLVRAAIQWSLANKRKNINFVHKGNIMKYTEGAFAEWGYALAKREFRNDVVTERESWILGNKEAKANISVEDNAKAIDPGFDMMSPAQQNDIKKEVEEALKLWPTHGDGKWKSKLMLKDSIADVTLQFVLIRPKDYDVIATMNLNGDYLSDALAAQVGGIGIAPGANINYDSGHAVFEATHGTAPKYADLDKVNPGSVILSGEMMLRYMGWLEAADLIIKGIEGAVNAKTVTYDFERLMPGAKLVSCSGFGDAIIANM*