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PLM1_100_b1_sep16_scaffold_1063

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_1063_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(156..701)
-----------------
DNA (546bp)
protein (182aa)
Protein clustered with ribosomal protein L32p Tax=Patulibacter medicamentivorans RepID=H0E9S5_9ACTN
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1063_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(733..1233)
-----------------
DNA (501bp)
protein (167aa)
Archaeal/vacuolar-type H+-ATPase subunit H Tax=Patulibacter medicamentivorans RepID=H0E9S0_9ACTN
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_100_b1_sep16_scaffold_1063_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1247..1798)
-----------------
DNA (552bp)
protein (184aa)
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1F3_CONWI
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1063_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1941..2477)
-----------------
DNA (537bp)
protein (179aa)
Ribosomal RNA small subunit methyltransferase D Tax=Patulibacter medicamentivorans RepID=H0E9R8_9ACTN
methyltransferase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1063_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2452..4479)
-----------------
DNA (2028bp)
protein (676aa)
RecG-like helicase Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D1C6_PELTS
RecG; ATP-dependent DNA helicase RecG
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1063_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(4569..5483)
-----------------
DNA (915bp)
protein (305aa)
Cupin domain protein Tax=Patulibacter medicamentivorans RepID=H0E971_9ACTN
cupin
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1063_7
[Bacillus] selenitireducens, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5483..6349)
-----------------
DNA (867bp)
protein (289aa)
DegV family protein Tax=Bacillus selenitireducens (strain ATCC 700615 / DSM 15326 / MLS10) RepID=D6XTS5_BACIE
DegV family protein
DegV family protein {ECO:0000313|EMBL:ADH99211.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Sporolactobacillaceae; unclassified Sporolactobacillaceae.;" source="Bacillus selenitireducens (strain ATCC 700615 / DSM 15326 / MLS10).;"
PLM1_100_b1_sep16_scaffold_1063_8
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(6333..6728)
-----------------
DNA (396bp)
protein (132aa)
chemotaxis protein CheY Tax=Frankia sp. BMG5.12 RepID=UPI00036CC9B8
two component LuxR family transcriptional regulator
Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
PLM1_100_b1_sep16_scaffold_1063_9
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6744..8303)
-----------------
DNA (1560bp)
protein (520aa)
Dak phosphatase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AW96_RUBXD
Dak phosphatase
Dak phosphatase {ECO:0000313|EMBL:ABG04332.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM1_100_b1_sep16_scaffold_1063_10
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists


comp(8267..8395)
-----------------
DNA (129bp)
protein (43aa)
50S ribosomal protein L28 Tax=Patulibacter americanus RepID=UPI0003B463E6
50S ribosomal protein L28
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_1063_11
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(8489..8968)
-----------------
DNA (480bp)
protein (160aa)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase bin=GWE2_Spirochaete_31_10 species=Sulfurihydrogenibium azorense genus=Sulfurihydrogenibium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWE2_Spirochaete_31_10 organism_group=Spirochaetes organism_desc=Good +
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_1063_12
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(8993..10261)
-----------------
DNA (1269bp)
protein (423aa)
Riboflavin biosynthesis protein RibBA Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1G0_CONWI
3,4-dihydroxy-2-butanone 4-phosphate synthase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_1063_13
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(10437..10976)
-----------------
DNA (540bp)
protein (180aa)
riboflavin synthase subunit alpha; K00793 riboflavin synthase [EC:2.5.1.9] bin=bin9_gal15 species=Streptomyces sp. MspMP-M5 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
ribC; riboflavin synthase subunit alpha (EC:2.5.1.9)
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_1063_14
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(11017..12003)
-----------------
DNA (987bp)
protein (329aa)
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RYK7_THEOJ
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_1063_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(12005..12682)
-----------------
DNA (678bp)
protein (226aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1H4_CONWI
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1063_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(12705..13931)
-----------------
DNA (1227bp)
protein (409aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
hypothetical protein Tax=Patulibacter americanus RepID=UPI0003B6B0D5
sun protein
PLM1_100_b1_sep16_scaffold_1063_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(13928..14734)
-----------------
DNA (807bp)
protein (269aa)
Methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase Tax=Patulibacter medicamentivorans RepID=H0E2C5_9ACTN
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1063_18
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(14731..15303)
-----------------
DNA (573bp)
protein (191aa)
Peptide deformylase Tax=Patulibacter medicamentivorans RepID=H0E2C6_9ACTN
peptide deformylase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_1063_19
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15338..15598)
-----------------
DNA (261bp)
protein (87aa)
Uncharacterized protein Tax=Gordonia rhizosphera NBRC 16068 RepID=K6W3Y3_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KGM15568.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
transglycosylase
PLM1_100_b1_sep16_scaffold_1063_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(15637..17586)
-----------------
DNA (1950bp)
protein (650aa)
Primosomal protein N Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1I1_CONWI
primosomal protein N'
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1063_21
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

17594..18271
-----------------
DNA (678bp)
protein (226aa)
Uncharacterized protein Tax=Alicyclobacillus acidoterrestris ATCC 49025 RepID=T0CJV2_9BACL
ideR; Iron dependent repressor
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_1063_22
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18268..18987)
-----------------
DNA (720bp)
protein (240aa)
hypothetical protein Tax=Frankia sp. BCU110501 RepID=UPI00037E0F94
hypothetical protein
Putative secreted protein {ECO:0000313|EMBL:ABW14650.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM1_100_b1_sep16_scaffold_1063_23
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(19008..20261)
-----------------
DNA (1254bp)
protein (418aa)
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1I3_CONWI
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1063_24
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(20248..21240)
-----------------
DNA (993bp)
protein (331aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] Tax=Moorella thermoacetica (strain ATCC 39073) RepID=GPDA_MOOTA
NAD-dependent glycerol-3-phosphate dehydrogenase-like
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_1063_25
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(21281..22594)
-----------------
DNA (1314bp)
protein (438aa)
GTPase Der Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1I5_CONWI
ribosome-associated GTPase EngA
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_100_b1_sep16_scaffold_1063_26
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(22599..23060)
-----------------
DNA (462bp)
protein (154aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase Tax=Pelosinus fermentans JBW45 RepID=I9NWW0_9FIRM
1-acyl-sn-glycerol-3-phosphate acyltransferase
Tax=RBG_16_Actinobacteria_67_10_curated
Displaying 26 items

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