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PLM1_100_b1_sep16_scaffold_1704

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_100_b1_sep16_scaffold_1704_1
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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1..1254
-----------------
DNA (1254bp)
protein (418aa)
HTH-type transcriptional regulator malT bin=bin9_gal15 species=Actinoplanes globisporus genus=Actinoplanes taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
HTH-type transcriptional regulator malT
Tax=CSP1_3_Armatimonadetes
PLM1_100_b1_sep16_scaffold_1704_2
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1357..1629
-----------------
DNA (273bp)
protein (91aa)
hypothetical protein bin=bin9_gal15 species=Deinococcus apachensis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin9_gal15 organism_group=GAL15
Uncharacterized protein {ECO:0000313|EMBL:KGM46671.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22II-S11g.;"
hypothetical protein
PLM1_100_b1_sep16_scaffold_1704_3
unknown

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1766..1942
-----------------
DNA (177bp)
protein (59aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1704_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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2573..3943
-----------------
DNA (1371bp)
protein (457aa)
Sensor protein Tax=uncultured bacterium RepID=C5JBG9_9BACT
PAS domain-containing protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_100_b1_sep16_scaffold_1704_5
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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3965..4777
-----------------
DNA (813bp)
protein (271aa)
Luciferase-like, subgroup Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TVT2_9CHLR
Luciferase-like, subgroup {ECO:0000313|EMBL:EFH84315.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
luciferase-like protein
PLM1_100_b1_sep16_scaffold_1704_6
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4774..6831)
-----------------
DNA (2058bp)
protein (686aa)
carbonate dehydratase Tax=Amycolatopsis balhimycina RepID=UPI00037D6799
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EOD66693.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
heavy metal translocating P-type ATPase
PLM1_100_b1_sep16_scaffold_1704_7
Streptomyces sp. 769, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(6828..7031)
-----------------
DNA (204bp)
protein (68aa)
Metal associated protein Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8K446_STREN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC60091.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 769.;"
PLM1_100_b1_sep16_scaffold_1704_8
unknown

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comp(7053..7235)
-----------------
DNA (183bp)
protein (61aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1704_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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7573..8472
-----------------
DNA (900bp)
protein (300aa)
Extracellular solute-binding protein Tax=Nocardioides sp. CF8 RepID=R7XVX1_9ACTO
family 3 extracellular solute-binding protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1704_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

8539..9297
-----------------
DNA (759bp)
protein (253aa)
Glutamine ABC transporter, permease protein, putative Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BED3_STRRD
glutamine ABC transporter permease
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_100_b1_sep16_scaffold_1704_11
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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9294..10049
-----------------
DNA (756bp)
protein (252aa)
Putative ABC transporter ATP-binding protein Tax=Streptomyces sp. W007 RepID=H0BNE8_9ACTO
ABC transporter-like protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_100_b1_sep16_scaffold_1704_12
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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10053..10868
-----------------
DNA (816bp)
protein (272aa)
Uncharacterized protein Tax=Brevibacillus panacihumi W25 RepID=V6MER5_9BACL
Creatininase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_100_b1_sep16_scaffold_1704_13
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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10865..11845
-----------------
DNA (981bp)
protein (327aa)
Hypothetical conserved protein bin=GWC2_Chloroflexi_73_18 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
Tax=GWC2_RIF_CHLX_73_18_curated
PLM1_100_b1_sep16_scaffold_1704_14
unknown

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11806..11943
-----------------
DNA (138bp)
protein (46aa)

This feature has no annotations

PLM1_100_b1_sep16_scaffold_1704_15
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(11940..13538)
-----------------
DNA (1599bp)
protein (533aa)
NADH:flavin oxidoreductase Tax=Mycobacterium vaccae ATCC 25954 RepID=K0UHG8_MYCVA
NADH:flavin oxidoreductase/NADH oxidase
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM1_100_b1_sep16_scaffold_1704_16
Streptomyces glaucescens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13892..15511
-----------------
DNA (1620bp)
protein (540aa)
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein Tax=Streptomyces ipomoeae 91-03 RepID=L1KT54_9ACTO
acetolactate synthase
Acetolactate synthase {ECO:0000313|EMBL:AIR98520.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces glaucescens.;"
PLM1_100_b1_sep16_scaffold_1704_17
Desulfurivibrio alkaliphilus, Desulfurivibrio, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15508..16635
-----------------
DNA (1128bp)
protein (376aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfurivibrio.;" source="Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2).;"
Histidinol-phosphate aminotransferase Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z1J7_DESAT
histidinol-phosphate aminotransferase
PLM1_100_b1_sep16_scaffold_1704_18
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

16632..17717
-----------------
DNA (1086bp)
protein (362aa)
Putrescine ABC transporter, ATP-binding protein Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=A0QQ83_MYCS2
spermidine/putrescine ABC transporter ATP-binding protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_100_b1_sep16_scaffold_1704_19
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(17682..18563)
-----------------
DNA (882bp)
protein (294aa)
Polyamine ABC-transporter, inner membrane subunit Tax=Mycobacterium smegmatis MKD8 RepID=L8FNC4_MYCSM
polyamine ABC transporter permease
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_100_b1_sep16_scaffold_1704_20
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(18560..19219)
-----------------
DNA (660bp)
protein (220aa)
Binding-protein-dependent transport systems inner membrane component Tax=Mycobacterium rhodesiae JS60 RepID=G4HXW4_MYCRH
Polyamine ABC transporter permease
Tax=RBG_16_Actinobacteria_67_10_curated
Displaying 20 items

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