ggKbase home page

PLM4_90_b1_sep16_scaffold_587_3

Organism: PLM4_90_b1_sep16_Nitrospirae_41_18

near complete RP 46 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38 MC: 2
Location: 1125..3317

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus secretin PilQ bin=GWF2_Nitrospirae_44_13 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae similarity UNIREF
DB: UNIREF100
  • Identity: 42.8
  • Coverage: 768.0
  • Bit_score: 558
  • Evalue 8.80e-156
type 4 fimbrial biogenesis outer membrane protein PilQ similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 548.0
  • Bit_score: 384
  • Evalue 6.50e-104
Tax=CG_Nitrosp_02 similarity UNIPROT
DB: UniProtKB
  • Identity: 54.4
  • Coverage: 728.0
  • Bit_score: 725
  • Evalue 5.90e-206

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Nitrosp_02 → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 2193
ATGACTCAGAAGTTAGAAGTCAGAAGTCACAAAGTGAAAGATAAAAAGAAGAGTAAAAGAAAATACCTCAGATTACATTTTTTATCTTTTATGATATTTTGTTCTCTGTTTTTTGCTATCTGGGGTTGCGCAACAACAAGCGGTATCAAAGAATCTACACAACCAGAAGAGACAACCGTCATAACCGGCATAGACGTACAAGACAATTCTGTAACAATAAGAGTTAGCAAACCTTTCAGTTACACAATGTACAGGCCGGATGATCCCTACAAAGTGGTAGTTGAACTCCTTGATGTAAATACTGGTGCTTTCAACATGAAGATTATCTCTGACAAAGCAGGGGTAACAGAAATAGTGCCCTATCAGGTAAAGTCACCATCTTTATTGACGAGGCTTGAAATACTGCTTCAAATGCCTTCTGAAGTAGAACCTGAGTATCAGGACAATGAACTAAAAATCAAGCTAAAAGGAGGAGTTCCTAAGGAGGTTTTAAAAGAAGATGTTCCTCAACAGGAGGTCAGAAAGGTAGCAGAGATAAAAGAACCCGAACCAGCAACACCAGAACCTGAAGAGATCCCTCTTCCAAAGGCTACAGATATAACCAGCATCTCATTCGAAAGGGCTGCTGATAAGATTAACGTCCTTATCAAGGGTAACGGGTCAATGGACCCCAGTGTATTCAATCTGGATAATCGTATTGTAATTGATGTCCCTGATATTGCTGTAAGCGCTCCGCTACCTACAGAGGTAGTTTCACCTGTAAAGGGTATCAGGTTAGGAAAATATGATGGAAAAACAAGGATAGTCATAGATCTTAAAGAAAAAATAGATTTTGACATTACAACAATTAGAGATTCTATTGTGCTTGCCTTAATGCTTCCAATGGCTGAAAGAATCAAAGAGGAAAAGGTAGAGGTCTCAGAAGCCAAGGAGGAAGCTGAAGCCCCTGTTCAGGGAAAATATCCAGGCAAGAAGATATCCCTCGATTTTCAGGATGCCGACATAGTCCCGATATTTAGGCTACTTGCTGATATAAGCGGGTATAACATTGTCGTGAGTCCTGAGGTTAAAGGTAAATTGACAATGAAGCTTATCAATGTTCCCTGGGATCAAGCCCTTGACATAATACTAAAGACTTTTTCCCTTGGAAAGTCAATCGAGGGAAACATCATAAGGATTGCTCCCCATACGGTTTTTGCCAGGGAAAGCGATGAAGCGGTAAAGGCAAAGGAGTCTGAATTAAAGGCAATTTCTTTAGAGACAAAAATATTTCCGATCAGCTATGGTGATGTTACAGTCGTAGAGAAGGCAATCAAAGACTCCAAGATGCTCTCCCCGAGAGGGAGCATCAGTACTGACAAGAGGACCAGCTCTTTGACCATCTATGATGTGCCCGCTGTTTTCCCTCAGGTGGAAAATCTTCTCATCACCCTCGACAAACCCACACCACAGGTACTGATTGAGACAAGGATCGTTGAGATTTCTGAAACTGATGCAAGTGATTTAGGAATCCAGTGGGGAATAGGTCACCCGACAGGGAGCAAACCATTCAGAGGGACAATGGGACCAGGACCTTTTACAGGAGATAATTTCATCATTGATCTCCCCGCAGCAGGAGTGGGTGCAGGTTCTGGAGCAGGGATTGCTTTCGGAATCCTGAATACTACCCGGACAGCGGGACTTGACCTGCAGCTTTCTGCCCTCGAGACAATTGGCAGTAGCAGGACAATCACTAACCCGAGAGTCGTCACTACAGATAATGAAAAAGCTGTAATAACACAGGGTATCAGCCGGCCTTTTCCCAAGGTTGATGTTGCATCCGGACAGATATCAGTTGAATATAAAGATATTGCAATTACTACCGAGGTAACACCTCATATCACACCTGCAGGTTCTATAAATTTAATAGTCCTCTTAAAAAAGGAAGATATTATAGATACAATAGTCATTTCTGGAGGTGAGGTACCGATCACCTCTAAAGTAGAATCAAATACTAAAGTCCTTATACAGGATGGAGAAACACTTGTTATCGGTGGTGTCTTAAAAAGGTCACAAAGAGAAACAATTTCAGGTCTTCCGGGATTAATGAATATCCCCATTTTTGGCTGGTTATTCAAAGGAAAATCAACAACGGAAGAGAACACGGAGCTCATGATATTCATCACGCCAAAAATAGTGGAAAAACCTATATGA
PROTEIN sequence
Length: 731
MTQKLEVRSHKVKDKKKSKRKYLRLHFLSFMIFCSLFFAIWGCATTSGIKESTQPEETTVITGIDVQDNSVTIRVSKPFSYTMYRPDDPYKVVVELLDVNTGAFNMKIISDKAGVTEIVPYQVKSPSLLTRLEILLQMPSEVEPEYQDNELKIKLKGGVPKEVLKEDVPQQEVRKVAEIKEPEPATPEPEEIPLPKATDITSISFERAADKINVLIKGNGSMDPSVFNLDNRIVIDVPDIAVSAPLPTEVVSPVKGIRLGKYDGKTRIVIDLKEKIDFDITTIRDSIVLALMLPMAERIKEEKVEVSEAKEEAEAPVQGKYPGKKISLDFQDADIVPIFRLLADISGYNIVVSPEVKGKLTMKLINVPWDQALDIILKTFSLGKSIEGNIIRIAPHTVFARESDEAVKAKESELKAISLETKIFPISYGDVTVVEKAIKDSKMLSPRGSISTDKRTSSLTIYDVPAVFPQVENLLITLDKPTPQVLIETRIVEISETDASDLGIQWGIGHPTGSKPFRGTMGPGPFTGDNFIIDLPAAGVGAGSGAGIAFGILNTTRTAGLDLQLSALETIGSSRTITNPRVVTTDNEKAVITQGISRPFPKVDVASGQISVEYKDIAITTEVTPHITPAGSINLIVLLKKEDIIDTIVISGGEVPITSKVESNTKVLIQDGETLVIGGVLKRSQRETISGLPGLMNIPIFGWLFKGKSTTEENTELMIFITPKIVEKPI*