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PLM4_90_b1_sep16_scaffold_587_6

Organism: PLM4_90_b1_sep16_Nitrospirae_41_18

near complete RP 46 / 55 MC: 1 BSCG 49 / 51 ASCG 12 / 38 MC: 2
Location: comp(6512..7267)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase B (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 61.1
  • Coverage: 239.0
  • Bit_score: 295
  • Evalue 1.00e-77
Pseudouridine synthase bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum) similarity UNIREF
DB: UNIREF100
  • Identity: 67.9
  • Coverage: 234.0
  • Bit_score: 322
  • Evalue 2.80e-85
Tax=RBG_13_Nitrospirae_43_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 245.0
  • Bit_score: 360
  • Evalue 1.30e-96

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Taxonomy

RBG_13_Nitrospirae_43_8_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 756
ATGGTATTATTTTCCTTCATGGAAAAAAGGCTTCAGAAGATTATCTCTGAAATGGGCATTGCTTCGCGGAGAAAAGCGGAGGAACTCATTCTTGAGGGAGAAGTGACTGTTAATGGCAAGGTTGCAACAATCGGAATGAAGGCAGATCCTGAAAAAGATTACATAAGGGTTGGAGGGAAGCTGATTACAGGGTTTAGGAAGGGCATCAGAAAAGTGTATCTGATGTTCAATAAGCCAAGAGGCGTTGTGACGACCTTGTTTGATCCTGAAGGGAGAGCCACTGTAAAGGATTTTCTGAAAGGTGTAAAATACAGAGTGTTTCCTGTAGGAAGACTTGATTTCGACTCTGAGGGGCTTCTCTTGTTGACAAACGATGGGGATTTTGCCAATGCCGTAATGCATCCTTCAAAGAAGATATCAAAGACATACCTCGTTAAGGTAAAGGACATAATAGAAGAAAAAAACATTGAGAAATTACAGAGAGGAATAAGTCTTGAAGATGGAAAAACCCTGCCCGCTAAGATAAGGAAAGTTAGGGAGTTAGAGAAAAACTCCTGGATTGAGATCACCCTTTTTGAAGGCCGAAAAAGGCAAATCAGGAGGATGCTGGAGTATATTGGTCATCCTGTTATTGTTCTGAGAAGAATCAGTGTTAACGGGCTTAAACTGAAAGACCTTAAAGAAGGGGAAATCCGGCATTTAACCCCTGATGAGCTCAAGCTTATCAGAAGAAAGACAAGCTTGTATGATTCGTGA
PROTEIN sequence
Length: 252
MVLFSFMEKRLQKIISEMGIASRRKAEELILEGEVTVNGKVATIGMKADPEKDYIRVGGKLITGFRKGIRKVYLMFNKPRGVVTTLFDPEGRATVKDFLKGVKYRVFPVGRLDFDSEGLLLLTNDGDFANAVMHPSKKISKTYLVKVKDIIEEKNIEKLQRGISLEDGKTLPAKIRKVRELEKNSWIEITLFEGRKRQIRRMLEYIGHPVIVLRRISVNGLKLKDLKEGEIRHLTPDELKLIRRKTSLYDS*