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PLM4_90_b1_sep16_scaffold_5620

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_5620_1
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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2..835
-----------------
DNA (834bp)
protein (278aa)
PAS domain S-box Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7U5P7_9ARCH
PAS domain S-box
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_5620_2
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(971..1303)
-----------------
DNA (333bp)
protein (111aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_5620_3
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

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1762..2205
-----------------
DNA (444bp)
protein (148aa)
Uncharacterized protein Tax=Sulfolobus solfataricus RepID=D0KNR2_SULS9
hypothetical protein
Tax=RBG_16_Thaumarchaeota_49_8_curated
PLM4_90_b1_sep16_scaffold_5620_4
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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2476..3651
-----------------
DNA (1176bp)
protein (392aa)
TGS domain protein Tax=Ignisphaera aggregans (strain DSM 17230 / JCM 13409 / AQ1.S1) RepID=E0SP59_IGNAA
TGS domain-containing protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_5620_5
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(3667..4053)
-----------------
DNA (387bp)
protein (129aa)
30S ribosomal protein S7 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EEY6_PYRF1
30S ribosomal protein S7
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_5620_6
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(4053..4256)
-----------------
DNA (204bp)
protein (68aa)
30S ribosomal protein S7 Tax=Caldisphaera lagunensis (strain DSM 15908 / JCM 11604 / IC-154) RepID=L0ABD5_CALLD
Suspect SCG annotation. See neighboring gene [PLM4_90_b1_sep16_scaffold_5620_5].
ribosomal protein S7/S5
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_5620_7
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(4253..4693)
-----------------
DNA (441bp)
protein (147aa)
30S ribosomal protein S12 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYR4_METFV
30S ribosomal protein S12
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_5620_8
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(4796..5200)
-----------------
DNA (405bp)
protein (135aa)
Putative uncharacterized protein Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=A3DMB5_STAMF
hypothetical protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_5620_9
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(5269..5925)
-----------------
DNA (657bp)
protein (219aa)
Putative thymidine phosphorylase Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WPV4_METH6
Putative thymidine phosphorylase
Tax=RBG_13_Bathyarchaeota_46_16b_curated
Displaying 9 items

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