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PLM4_90_b1_sep16_scaffold_100

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_90_b1_sep16_scaffold_100_1
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3..227
-----------------
DNA (225bp)
protein (75aa)
2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HNF1_ACIS0
2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family
Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
PLM4_90_b1_sep16_scaffold_100_2
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

315..761
-----------------
DNA (447bp)
protein (149aa)
Uncharacterized protein Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RZM1_FERPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC65934.1}; Flags: Precursor;; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;" source="Ferroglobus placidus (strain DSM 10642 / AEDII12DO).;"
PLM4_90_b1_sep16_scaffold_100_3
Ferroglobus placidus, Ferroglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

761..1780
-----------------
DNA (1020bp)
protein (340aa)
Uncharacterized protein Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RZM1_FERPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC65934.1}; Flags: Precursor;; species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Ferroglobus.;" source="Ferroglobus placidus (strain DSM 10642 / AEDII12DO).;"
PLM4_90_b1_sep16_scaffold_100_4
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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1960..3048
-----------------
DNA (1089bp)
protein (363aa)
Threonine synthase Tax=Korarchaeum cryptofilum (strain OPF8) RepID=B1L4N8_KORCO
threonine synthase
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_100_5
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

3166..4827
-----------------
DNA (1662bp)
protein (554aa)
Thermosome subunit Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7T9L4_9ARCH
thsA4; archaeal thermosome
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_100_6
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

4855..5091
-----------------
DNA (237bp)
protein (79aa)
DNA-directed RNA polymerase subunit K Tax=Thermofilum pendens (strain Hrk 5) RepID=RPOK_THEPD
RNA polymerase Rpb6
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_100_7
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(5093..5629)
-----------------
DNA (537bp)
protein (179aa)
Uncharacterized protein Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0EG30_PYRF1
hypothetical protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_100_8
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(5586..6923)
-----------------
DNA (1338bp)
protein (446aa)
pyrC; Dihydroorotase (EC:3.5.2.3)
Dihydroorotase Tax=Methanobacterium formicicum DSM 3637 RepID=K2Q9H6_METFO
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_100_9
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(7109..8017)
-----------------
DNA (909bp)
protein (303aa)
Uncharacterized protein Tax=Methanolobus psychrophilus R15 RepID=K4MDZ2_9EURY
hypothetical protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_100_10
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(8030..8815)
-----------------
DNA (786bp)
protein (262aa)
CBS domain-containing protein Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PY91_METTM
CBS domain-containing protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_100_11
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(8827..9411)
-----------------
DNA (585bp)
protein (195aa)
Hypothetical conserved protein Tax=uncultured crenarchaeote RepID=H5SB85_9CREN
CBS-domain-containing protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_100_12
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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9583..10479
-----------------
DNA (897bp)
protein (299aa)
Putative uncharacterized protein Tax=delta proteobacterium MLMS-1 RepID=Q1NKG0_9DELT bin=ACD20 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
hypothetical protein
Tax=RBG_13_Bathyarchaeota_52_12_curated
PLM4_90_b1_sep16_scaffold_100_13
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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10612..10905
-----------------
DNA (294bp)
protein (98aa)
Ribosomal protein S26 Tax=uncultured crenarchaeote DeepAnt-EC39 RepID=Q6W3A1_9CREN
ribosomal protein S26e
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_100_14
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(10908..11522)
-----------------
DNA (615bp)
protein (205aa)
Phosphatidylglycerophosphate synthase Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6U283_9EURY
pgsA1; phosphatidylglycerophosphate synthase PgsA1
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_100_15
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

Not on your lists

11591..11884
-----------------
DNA (294bp)
protein (98aa)
Uncharacterized protein Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HPI7_ACIS0
hypothetical protein
Tax=RBG_13_Bathyarchaeota_52_12_curated
PLM4_90_b1_sep16_scaffold_100_16
Sulfolobus acidocaldarius, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

11902..12534
-----------------
DNA (633bp)
protein (211aa)
UPI0003D5EC47 related cluster Tax=unknown RepID=UPI0003D5EC47
DNA polymerase
DNA polymerase {ECO:0000313|EMBL:AHC50674.1}; species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source="Sulfolobus acidocaldarius SUSAZ.;"
PLM4_90_b1_sep16_scaffold_100_17
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(12591..13361)
-----------------
DNA (771bp)
protein (257aa)
Putative transcriptional regulator Tax=Thermococcus sp. CL1 RepID=I3ZV27_9EURY
transcriptional regulator
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_100_18
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(13442..14341)
-----------------
DNA (900bp)
protein (300aa)
Putative uncharacterized protein Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KT02_ARCVS
Permeases of the drug/metabolite transporter (DMT) superfamily
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_100_19
BJP_S1_SUB10_Methanoculleus_61_9, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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14452..15123
-----------------
DNA (672bp)
protein (224aa)
B3/4 domain protein Tax=Methanolinea tarda NOBI-1 RepID=G6FH68_9EURY
B3/4
Tax=BJP_S1_SUB10_Methanoculleus_61_9
PLM4_90_b1_sep16_scaffold_100_20
Thermofilum sp. 1910b, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(15129..15563)
-----------------
DNA (435bp)
protein (145aa)
Uncharacterized protein Tax=Thermofilum sp. 1910b RepID=S6A5M5_9CREN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGT35337.1}; species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum sp. 1910b.;"
PLM4_90_b1_sep16_scaffold_100_21
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

15734..16504
-----------------
DNA (771bp)
protein (257aa)
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IP18_NITGG
Tax=RBG_16_Thaumarchaeota_49_8_curated
PLM4_90_b1_sep16_scaffold_100_22
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(16543..16695)
-----------------
DNA (153bp)
protein (51aa)
hypothetical protein Tax=unclassified candidate division pSL4 RepID=UPI000366BD75
hypothetical protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_100_23
Thaumarchaeota archaeon SCGC AB-539-E09, Thaumarchaeota, Archaea

Not on your lists

16909..18111
-----------------
DNA (1203bp)
protein (401aa)
GMP synthase Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TSV0_9ARCH
GMP synthase {ECO:0000313|EMBL:EMR73036.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon SCGC AB-539-E09.;"
GMP synthase
PLM4_90_b1_sep16_scaffold_100_24
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

18285..18512
-----------------
DNA (228bp)
protein (76aa)
hypothetical protein Tax=unclassified candidate division pSL4 RepID=UPI000361CE87
hypothetical protein
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_100_25
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(18496..18831)
-----------------
DNA (336bp)
protein (112aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_100_26
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

18947..19219
-----------------
DNA (273bp)
protein (91aa)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methanothermus.;" source="Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 /; V24 S).;"
Acylphosphatase Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYF7_METFV
acylphosphatase
PLM4_90_b1_sep16_scaffold_100_27
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(19246..19686)
-----------------
DNA (441bp)
protein (147aa)
Tax=RBG_13_Bathyarchaeota_46_16b_curated
PLM4_90_b1_sep16_scaffold_100_28
Pyrobaculum aerophilum, Pyrobaculum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

19780..20826
-----------------
DNA (1047bp)
protein (349aa)
RNA 3'-terminal-phosphate cyclase (EC:6.5.1.4)
RNA 3'-terminal phosphate cyclase {ECO:0000255|HAMAP-Rule:MF_00200}; Short=RNA cyclase {ECO:0000255|HAMAP-Rule:MF_00200};; Short=RNA-3'-phosphate cyclase {ECO:0000255|HAMAP-Rule:MF_00200};; EC=6.5.1.4 {ECO:0000255|HAMAP-Rule:MF_00200};; species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Pyrobaculum.;" source="Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630; / NBRC 100827).;"
RNA 3'-terminal phosphate cyclase Tax=Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) RepID=RTCA_PYRAE
PLM4_90_b1_sep16_scaffold_100_29
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

20823..21512
-----------------
DNA (690bp)
protein (230aa)
Putative methyltransferase Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LHF0_ACEWD
putative methyltransferase
Tax=RBG_13_Bathyarchaeota_46_16b_curated
Displaying 29 items

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