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PLM1_100_coex_sep16_scaffold_3404_1

Organism: PLM1_100_coex_sep16_Rokubacteria_71_11

near complete RP 46 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38 MC: 2
Location: comp(3..3176)

Top 3 Functional Annotations

Value Algorithm Source
rpoC; RNA polymerase, beta prime subunit (EC:2.7.7.6) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 87.6
  • Coverage: 1059.0
  • Bit_score: 1862
  • Evalue 0.0
rpoC; RNA polymerase, beta prime subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 68.4
  • Coverage: 1040.0
  • Bit_score: 1449
  • Evalue 0.0
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 1058.0
  • Bit_score: 1977
  • Evalue 0.0

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 3174
ATGCTGACGGATCGGCCTTTCGGCAGCCTGATCAGAGAGGACAAGCCTACCAAGGACCTGTGGGGCATCCTCGATCGGCATGCGAAGCCCATCACGTTTGACGCGATTCGGATCAAGCTCGCGGCGCCGCAGAAGATCCGCGACTGGTCGCACGGCGAGGTGAAGAAGCCGGAGACCATCAACTACCGGACCTTCAAGCCGGAGCGCGACGGTCTGTTCTGCGCGCGCATCTTCGGGCCCACCAAGGACTACGAGTGCGCGTGCGGCAAGTACAAGCGGATGAAGTTTGCCGGCGTCATCTGCGACAAGTGCGGCGTCGAGGTGACGCGGGCCCGGGTGCGGCGCGAGCGCATGGGCCACATCGAGCTGGCCTCGCCCGTGTCCCACGTGTGGTTCTTCAAGGGGCTGCCCAGCCGCATCGGCCAGCTCCTCGACATGTCGCTGCGCGAGCTGGAGAAGATCCTCTACTTCGAGGAGTACGTGTGCCTCGAGTCGCGGATCAACGGCGTCAAGAAGAAGGACCTGGTCGGCGTCGACAAGGTCCGCAAGCTGCACGAGGAGCACGGCCCCGAGGCCCTCAAGGTCGGCATGGGCGCCGAGGCCATCCGCGAGCTGCTGCGCGACATGGACCTCGACTCGCTGGCCCGCGACCTCCGGGCCCAGATGCTGGGCGAGACCTCGATCCAGAAGCGCAAGAAGATCGTCAAGCGCTTGAAGGTCATCGAGGCCTTCCTGAAATCCGGTAACCAGCCGGAGTGGATGATCCTCGAGGTCGTCCCGGTCATCCCGCCCGAGCTGCGCCCGCTGGTGCCGCTCGACGGCGGGCGCTTCGCGACGTCGGACCTGAACGATCTCTACCGGCGCGTCATCAACCGCAACAATCGCCTCAAGCGCCTCATGGACCTCAAGGCGCCCGAGATCATCATCCGCAACGAAAAGCGGATGCTCCAGGAGGCCGTCGACGCGCTGTTCGACAACGGCCGCCGGGGCCGCGTGATCACGGGTCCGAACAATCGCCCGCTCAAGTCCCTGAGCGACACGCTGAAGGGCAAGCAGGGCCGGTTCCGCCAGAACCTGCTCGGCAAGCGCGTGGACTATTCGGGGCGCTCGGTCATCGTGGTGGGGCCCTATCTGAAGCTGCACCAGTGTGGCCTGCCGAAGAAGATGGCCCTGGAGCTCTTCAAGCCCTTCATCTTGAGGAAGCTCGAGGAGCGTGGTATCGCCTCGTCCATCAAGGCCGCCAAGAAGTTCGTCGAGAAGGAGCGGCCGGAGGTCTGGGACATTCTCGACGACGTCATCAAGGAGCACCCGGTGCTGCTGAACCGGGCGCCGACGCTCCACCGTCTCGGCATCCAGGCCTTCGAGCCCATCCTGGTCGAGGGCAAGGCCATCGAGATCCACCCGCTGGTCTGCACGGCCTTCAACGCGGACTTCGACGGCGACCAGATGGCGGTCCACATCCCGCTGTCGATGGAAGCCCAGCTCGAGGCCCAGGTGCTGATGCTGTCGGCCAACAACATCCTGTCGCCGTCCAACGGCGCGCCGATCGCGGTGCCGACGCAGGACATGGTGCTCGGCATCTACTACCTGACCAAGGAGCGGCTGTCCACGCCCGACCACCCGGTGCGGGGCGAGGGCCGGCTGTTCGCCGACCCCGAAGAGGTCCGGATCGCCTACGACAACGAGGACGTCGATCTGCAGGCCCGCATCCGTCTGCGCTGGAAGGGAGAGATCTTCGACACCACCGTGGGCCGCACGCTCTTCAACGAGACCGTGCCGGAGCCGCTGCGGTTCGTGAACCAGGAGCTGAAGAAGAAGGAGGTCACCGCCCTCGTCGCCCGCTGCATGAATCAGCTCGGCAACGAGGCCACCGTGCACTTCCTCGACGAGCTGAAGGACCTCGGTTTCCGCTACGCCACGCTGTCGGGGCTGTCGATCGGCATCGACGACATGCACATCCCGTCGTCGAAGGAGCAGCTGATCGCCAACGCGCGGGCCCAGGTGATGGAGGTCGAGACCCAGTACCAGGACGGCGTCATCACCAACGGCGAACGCTACAACAAGGTCGTCGACATCTGGGCCCACGTGACCGAGCAGATCGCCGACCAGATGTTCAAGGAGCTGGAGGACGGCGAGCAGGGTGGCGAGTTCAACCCCATCTTCATGATGGCCGACTCGGGCGCCCGGGGCTCCAAGCAGCAGATCCGCCAGCTGGCCGGCATGCGCGGTCTCATGGCCAAGCCGTCGGGCGAGATCATCGAGACGCCGATCACGTCGAACTTCCGCGAGGGCCTCACCGTGCTGGAGTACTTCACCTCCACCCACGGCGCCCGCAAGGGCCTGGCCGACACCGCGCTGAAGACGGCCGACTCCGGCTATCTGACGCGCCGGCTCGTCGACGTCGCCCAGGACGTCATCGTCAGTGAGTACGACTGCGGGACCGTGAAGTACATCGAGGCCACCCCGCTCGTCGAGGGCGGCGACATCATCCAGTCCCTCCGCGACCGCATCCTCGGCCGCACGACCGCCGAGGACGTGCGGGACCCGCTGTCGCAGGAGATCATCGTCCAGGGCAACACCGAGATCATCGAGGAGCTGGCCCAGAAGATCGAGGACTCCGGCCTCGAGCGGGTCCGCATCCGTTCGACCCTGACCTGCGACACCAAGCGCGGCATCTGCGTGCTGTGCTACGGCCGCAACCTCGGCTCCGGCCGCCTGGCCGAGCTGGGCGAGGCGGTCGGCATCATCGCTGCCCAGTCCATCGGCGAGCCGGGCACCCAGCTCACGATGCGGACGTTCCACATCGGCGGCACCGCCAGCCGGGTCGTCGAGGCGTCCAAGCACGAGTCGAAGAGCGCGGGGGTGGCGAAGTTCCACAACCTGCGCACCGTCGTCAACCGCGACGGCGATCTGGTGGCCACCAACCGCAACGGCGAGATCGCCGTGGCCGACGAGCGCGGGCGCGAGCGCGAGCGGTACCCGGTCGTGTACGGCGCCAAGATCAAGGTCAAGGCCGACCAGAAGGTCAAGCTCCGCACGGTGCTGGTCGAGTGGGATCCGTTCACCAACCCGATCCTCACGGAGTTCACCGGGAAGGTGGAGTACCAGGACATCGTCGAGAACGTGACCGTGCGCGAGGAGTTCGACGAGGTCACCGGCCTGTCGCGGCGGGTG
PROTEIN sequence
Length: 1058
MLTDRPFGSLIREDKPTKDLWGILDRHAKPITFDAIRIKLAAPQKIRDWSHGEVKKPETINYRTFKPERDGLFCARIFGPTKDYECACGKYKRMKFAGVICDKCGVEVTRARVRRERMGHIELASPVSHVWFFKGLPSRIGQLLDMSLRELEKILYFEEYVCLESRINGVKKKDLVGVDKVRKLHEEHGPEALKVGMGAEAIRELLRDMDLDSLARDLRAQMLGETSIQKRKKIVKRLKVIEAFLKSGNQPEWMILEVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMDLKAPEIIIRNEKRMLQEAVDALFDNGRRGRVITGPNNRPLKSLSDTLKGKQGRFRQNLLGKRVDYSGRSVIVVGPYLKLHQCGLPKKMALELFKPFILRKLEERGIASSIKAAKKFVEKERPEVWDILDDVIKEHPVLLNRAPTLHRLGIQAFEPILVEGKAIEIHPLVCTAFNADFDGDQMAVHIPLSMEAQLEAQVLMLSANNILSPSNGAPIAVPTQDMVLGIYYLTKERLSTPDHPVRGEGRLFADPEEVRIAYDNEDVDLQARIRLRWKGEIFDTTVGRTLFNETVPEPLRFVNQELKKKEVTALVARCMNQLGNEATVHFLDELKDLGFRYATLSGLSIGIDDMHIPSSKEQLIANARAQVMEVETQYQDGVITNGERYNKVVDIWAHVTEQIADQMFKELEDGEQGGEFNPIFMMADSGARGSKQQIRQLAGMRGLMAKPSGEIIETPITSNFREGLTVLEYFTSTHGARKGLADTALKTADSGYLTRRLVDVAQDVIVSEYDCGTVKYIEATPLVEGGDIIQSLRDRILGRTTAEDVRDPLSQEIIVQGNTEIIEELAQKIEDSGLERVRIRSTLTCDTKRGICVLCYGRNLGSGRLAELGEAVGIIAAQSIGEPGTQLTMRTFHIGGTASRVVEASKHESKSAGVAKFHNLRTVVNRDGDLVATNRNGEIAVADERGRERERYPVVYGAKIKVKADQKVKLRTVLVEWDPFTNPILTEFTGKVEYQDIVENVTVREEFDEVTGLSRRV