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PLM3_60_b1_sep16_scaffold_734_20

Organism: PLM3_60_b1_sep16_Nitrospirae_58_7

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 14 / 38
Location: comp(12655..13695)

Top 3 Functional Annotations

Value Algorithm Source
rluD2; 23S rRNA pseudouridine synthase (EC:4.2.1.70 5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 319.0
  • Bit_score: 433
  • Evalue 5.70e-119
Pseudouridine synthase Tax=Candidatus Nitrospira defluvii RepID=D8PA98_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 319.0
  • Bit_score: 433
  • Evalue 2.00e-118
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 315.0
  • Bit_score: 459
  • Evalue 2.20e-126

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Taxonomy

R_Nitrospirae_62_14 → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 1041
ATGACCATCGTCTCGTACCGCGATGGATTCTACCAGCGAGAGCCTCGGATGAACCAGCAGAAAGAGTGGCCGGCTTCGCGCACCGAGCTTGTCGTGACCGCCGGTGAGACACCCAAGCGGCTCGATGTATTTCTAGCCAATCGTGAGCCGATGCTGTCACGGTCGGCGCTCCAGCGTCTGATTCTGGATGGACGCATCACAATCAACGGCCTCCCCGTTAAGCCTAGCCAGAAGATAAAGCCGGGCGATCGGATCGTCTTACAGATTCCGCGGCCGGAACCGTTGGAGCTGAAGCCGGAGCCGATCCCGCTGGATGTCCTCTATGAGGATGAGGCGATTCTGGTCCTGAACAAGCCGGCTGGGCTTGTCGTGCATCCGGCACCGGGGCACTGGTCCGGCACGCTGGTCAATGCGCTCCTGCACCACTTCAACTCACCCCATGGATCACTGTCCACGATCGGTGGCAAGGAACGGCCAGGCCTCGTGCACCGGCTGGATAAGGAGACCTCGGGCGTCATGGTGGTGGCCAAGACCGATGAGGCTCATCGGTCTCTGGCTGCCCAATTCAAGCAGCACAGCATTACGCGCGTTTATGAGGCGCTGGCGTGGGGAGCCATCAAAAAGCCGGAAGGGATGATCGAGTTGGCCATTGGACGAGATGTGAAGGAGCGCAAGAAATTCTCGGCCCGTACTGCGCGGCCGAAAGCCTCAGTGACCGTCTATCGGGTCGTTCAGCGGCTTGGGAAACTGGCCACGTTGGTAGAGCTCTCCCCTCGAACAGGCCGGACCCACCAGATCCGAGTGCACTTGGCTGCGCTCGGTCATCCTGTGCTGGGCGATCCGACCTATGGAGGGAGAAAAGTGCGGGAGCTGGAAGGGGTGATGATCTCGCGCGTGATGCTCCACGCGCGGACACTGGGCTTCCTGCATCCAACGACTGGGCGCCACATGGGGCATTCTTCCCCCCTTCCTCTGGACATGAGCGCGGTGATTGATGCGCTCAAGCACATCGCATCCACGGCGCGTTCGACGCATGCTTGA
PROTEIN sequence
Length: 347
MTIVSYRDGFYQREPRMNQQKEWPASRTELVVTAGETPKRLDVFLANREPMLSRSALQRLILDGRITINGLPVKPSQKIKPGDRIVLQIPRPEPLELKPEPIPLDVLYEDEAILVLNKPAGLVVHPAPGHWSGTLVNALLHHFNSPHGSLSTIGGKERPGLVHRLDKETSGVMVVAKTDEAHRSLAAQFKQHSITRVYEALAWGAIKKPEGMIELAIGRDVKERKKFSARTARPKASVTVYRVVQRLGKLATLVELSPRTGRTHQIRVHLAALGHPVLGDPTYGGRKVRELEGVMISRVMLHARTLGFLHPTTGRHMGHSSPLPLDMSAVIDALKHIASTARSTHA*