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PLM3_60_coex_sep16_scaffold_2708

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_2708_1
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..813)
DNA (813bp) protein (271aa)
benzoate-CoA ligase (EC:6.2.1.25)
Benzoate-CoA ligase {ECO:0000313|EMBL:ABG04718.1}; EC=6.2.1.25 {ECO:0000313|EMBL:ABG04718.1};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Benzoate-CoA ligase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AV60_RUBXD
PLM3_60_coex_sep16_scaffold_2708_2
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1460..2911
DNA (1452bp) protein (484aa)
Uncharacterized protein {ECO:0000313|EMBL:EJZ34022.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
PLM3_60_coex_sep16_scaffold_2708_3
unknown

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2937..3560
DNA (624bp) protein (208aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2708_4
GWF2_Planctomycetes_41_51_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(3555..4235)
DNA (681bp) protein (227aa)
pectinesterase (EC:3.1.1.11)
Polygalacturonase bin=GWF2_Planctomycete_41_51 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
Tax=GWF2_Planctomycetes_41_51_curated
PLM3_60_coex_sep16_scaffold_2708_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

4493..6046
DNA (1554bp) protein (518aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_coex_sep16_scaffold_2708_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(6050..8725)
DNA (2676bp) protein (892aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003734AEA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ86676.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_60_coex_sep16_scaffold_2708_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8722..9072)
DNA (351bp) protein (117aa)
Transcriptional regulator, PadR-like family Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TUL4_9CHLR
transcriptional regulator PadR family protein
Transcriptional regulator PadR family protein {ECO:0000313|EMBL:AHG91653.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3_60_coex_sep16_scaffold_2708_8
RBG_13_Planctomycetes_44_8b_curated, Physcisphaerae, Planctomycetes, Bacteria

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comp(9190..9987)
DNA (798bp) protein (266aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003674E69
hypothetical protein
Tax=RBG_13_Planctomycetes_44_8b_curated
PLM3_60_coex_sep16_scaffold_2708_9
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

10351..11922
DNA (1572bp) protein (524aa)
Putative S12 family peptidase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4W0_GEMAT
putative S12 family peptidase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3_60_coex_sep16_scaffold_2708_10
unknown

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12026..13426
DNA (1401bp) protein (467aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2708_11
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(13383..15698)
DNA (2316bp) protein (772aa)
Gll1201 protein Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NLC5_GLOVI
hypothetical protein
Gll1201 protein {ECO:0000313|EMBL:BAC89142.1}; species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
PLM3_60_coex_sep16_scaffold_2708_12
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(15767..16081)
DNA (315bp) protein (105aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3_60_coex_sep16_scaffold_2708_13
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16327..17169
DNA (843bp) protein (281aa)
hypothetical protein Tax=Spirosoma spitsbergense RepID=UPI00036FF3F4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD57760.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
PLM3_60_coex_sep16_scaffold_2708_14
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(17211..18878)
DNA (1668bp) protein (556aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000365AE44
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_coex_sep16_scaffold_2708_15
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(18865..19965)
DNA (1101bp) protein (367aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003601526
cytochrome c, class I
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_coex_sep16_scaffold_2708_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

20129..20674
DNA (546bp) protein (182aa)
Uncharacterized protein Tax=Mesorhizobium sp. STM 4661 RepID=M5FLV0_9RHIZ
putative pyridoxine oxidase protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_2708_17
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(20708..21607)
DNA (900bp) protein (300aa)
UspA domain-containing protein Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DE92_HALXS
UspA domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3_60_coex_sep16_scaffold_2708_18
Bacillus akibai, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21686..21991
DNA (306bp) protein (102aa)
L-amino-acid oxidase (EC:1.4.3.2)
hypothetical protein Tax=Paenibacillus daejeonensis RepID=UPI000360ECC4
Tryptophan 2-monooxygenase {ECO:0000313|EMBL:GAE36394.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus akibai (strain ATCC 43226 / DSM 21942 / JCM 9157 / 1139).;"
PLM3_60_coex_sep16_scaffold_2708_19
unknown

Not on your lists

comp(22020..22127)
DNA (108bp) protein (36aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_2708_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(22178..23728)
DNA (1551bp) protein (517aa)
ABC efflux pump, inner membrane subunit Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHM3_KORVE
efflux ABC transporter inner membrane protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Displaying 20 items

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