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PLM3_60_coex_sep16_scaffold_463_25

Organism: PLM3_60_coex_sep16_Acidobacteria_65_11

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: 27684..28940

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 factor {ECO:0000313|EMBL:GAN45450.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 414.0
  • Bit_score: 479
  • Evalue 3.20e-132
Putative RNA polymerase, sigma-24 subunit, ECF subfamily bin=GWA2_Methylomirabilis_73_35 species=Leptolyngbya sp. PCC 6406 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 61.3
  • Coverage: 403.0
  • Bit_score: 474
  • Evalue 5.60e-131
putative RNA polymerase sigma factor containing a TPR repeat domain similarity KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 406.0
  • Bit_score: 458
  • Evalue 1.20e-126

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Taxonomy

Mizugakiibacter sediminis → Mizugakiibacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1257
ATGGCTGATGACCCGCGCGGGGTCGTCGAGCTCGTCGCGCGCGAGTCGTACGGCCGTCTCGTCGCGTATCTCTCGGCGCGCACCCACGACGTCGCGGCGGCAGAGGATGCCCTGGCCGAGGCGTTCCTGACGGCACTGCGGACCTGGCCGCGCGACGGCGTGCCCGCGAAACCCGAAGCGTGGCTGTTCACGACGGCGCGGCGGCGGCTGATCGACCGGGCGCGCCACGAACGCGTGCGAACCGAGGCGGAGCCGACGATTCAGCTGCTGCTGCACGAGCGAATGCATGGGACGGAAGCGATGGACGAGCGCGCCTTCCCCGACGAGCGGCTGAAACTGCTCTTCGTCTGCGCGCACCCCGACGTCGATCGGGCCATGCACACGCCGCTCATGCTGCAGGTCGTCCTGGGTCTCGACGCCGCGACGATCGCGAGCGCGTTCCTGACATCGCCCGCCGCGATGGGTCAGCGATTGAGCCGGGCGAAAGCCAGGATTCGCGACGCCGGCATCGCCTTCGAGATCCCCGACCGTCCGGCGCTGCCGGCGCGGCTCGACGCGGTGCTCGACGCCATCTACGCCGCATACGGCACCGGTTGGGACGATGTGGCTGGATCCGATCCGCGGCGGGGCGGTCTCGCGCAGGAAGCGGTGTGGCTGGTCCGTACGCTGCTGCAGCTTCTCCCAGACGAGCCGGAGGCGAGGGGCCTGCTGGCCCTGATGCTGTACTGCGAGGCGCGGCGACCGGCAAGGCGCGCCGCGAACGGCGACTACGTGCCGATGTCGGAGCAGGACGCGGGCCTCTGGTCCGCGGCGATGCTGGACGAAGCGGAGCGGGAACTCCTGGCTGCGGCCGCGCAGCACCGCGCGGGCCGCTTCCAGCTCGAGGCCGCGCTCCAGTCAGCCCACGTCGAAGGCGCTCGACGAGGCCGCACGGACTGGAGCGCGATCGCGGTATTGTACGAGGGACTGGTGCGCGCGACGCCGACCGTCGGCGCGTTCGTCGGCCGCGCGGCGGCGATCGCCGAGGCGGATGGTCCTTCAGCAGGACTCGACGCCCTCGATCGGATCGATCCATCGTCGACTAAGAGCTATCAACCGTACTGGGCCGTGCGCGCGCACCTCCTGCGCCGCACCGGGCGCAAAGACGAGGCGCTGGGCGCTTTCGATCGCGCCATCGGGCTGACCGAGGACGCTGCGACCCGGCAATTCCTTCTGCGCCGCCGCGCAGAGGCTGCTGTTCCAGCGGGCCTTTCATGA
PROTEIN sequence
Length: 419
MADDPRGVVELVARESYGRLVAYLSARTHDVAAAEDALAEAFLTALRTWPRDGVPAKPEAWLFTTARRRLIDRARHERVRTEAEPTIQLLLHERMHGTEAMDERAFPDERLKLLFVCAHPDVDRAMHTPLMLQVVLGLDAATIASAFLTSPAAMGQRLSRAKARIRDAGIAFEIPDRPALPARLDAVLDAIYAAYGTGWDDVAGSDPRRGGLAQEAVWLVRTLLQLLPDEPEARGLLALMLYCEARRPARRAANGDYVPMSEQDAGLWSAAMLDEAERELLAAAAQHRAGRFQLEAALQSAHVEGARRGRTDWSAIAVLYEGLVRATPTVGAFVGRAAAIAEADGPSAGLDALDRIDPSSTKSYQPYWAVRAHLLRRTGRKDEALGAFDRAIGLTEDAATRQFLLRRRAEAAVPAGLS*