ggKbase home page

PLM3_60_coex_sep16_scaffold_6875_9

Organism: PLM3_60_coex_sep16_Deltaproteobacteria_56_6

near complete RP 47 / 55 MC: 4 BSCG 48 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: comp(3812..4555)

Top 3 Functional Annotations

Value Algorithm Source
short-chain dehydrogenase/reductase SDR bin=bin1_lowGC species=Microbulbifer agarilyticus genus=Microbulbifer taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 250.0
  • Bit_score: 245
  • Evalue 4.30e-62
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 48.1
  • Coverage: 235.0
  • Bit_score: 220
  • Evalue 4.20e-55
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.8
  • Coverage: 239.0
  • Bit_score: 288
  • Evalue 4.70e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 744
ATGGCAAGCAGCAGCGAAAAAAAACTCTCCGGTAAAGTCGCGTTGATTACCGGCGGTAGCCGCGGCATCGGTCGCGCCATCGCCGCGGCCTATACGCGCGCCGGCGCTAGCGTGTTCATTTGCGGCCGGGATCAACGCGCCGTCGCCAGCGCGGTTAGCGAGCTGGGTGCTGACGGCGGCGCTATCGATGGCGCGGCGGGTGACATTGGCTCGCCTGACGATGCGCAACGCATTGTCCAAGGCGCCCTCAAGCGTTTCGGTACGATCGATGTGCTGGTTAACAACGCCGGTATCCTCGGTCCGCGCGTGGCGATCGCCGATTATTCGATCGCCGCATGGGATGAAGTCATGCGGATCAATCTTACCGGTCTTTTTTTGATTACCCATGAGGTGTTGCCGGTCATGCTGGCGCGGCGCTCGGGCTCGATCATCAACGTTACATCCGGCGTCGGTCGTGCCGGCAAAGCCAAATGGGGCGCCTACGCGGTTGCCAAAGCCGGCTTGGAGGGATTCACGCAGGTGCTTGCCGACGAAGTTAAATCATTGGCCATACGCGTGAATTCGGTCAATCCAGCGGCAACCCGAACCCGGATGCGGGCAGCAGCTTATCCGGCCGAAGACCCACTGACTCTCCCGACTGCCGAGTCGATTACACCTATCTTCATATATCTGGCTTCGGCCGAGTCGCTAGAGGTTACCGGGCAAGCCCTCCGCGCGCGGGATTGGCTAGCGCCGGGCAATTGA
PROTEIN sequence
Length: 248
MASSSEKKLSGKVALITGGSRGIGRAIAAAYTRAGASVFICGRDQRAVASAVSELGADGGAIDGAAGDIGSPDDAQRIVQGALKRFGTIDVLVNNAGILGPRVAIADYSIAAWDEVMRINLTGLFLITHEVLPVMLARRSGSIINVTSGVGRAGKAKWGAYAVAKAGLEGFTQVLADEVKSLAIRVNSVNPAATRTRMRAAAYPAEDPLTLPTAESITPIFIYLASAESLEVTGQALRARDWLAPGN*