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PLM3_60_coex_sep16_scaffold_1498_14

Organism: PLM3_60_coex_sep16_Alphaproteobacteria_Rhizobiales_61_7

near complete RP 44 / 55 MC: 5 BSCG 42 / 51 MC: 1 ASCG 7 / 38 MC: 1
Location: comp(10171..10410)

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly PilZ Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q218S5_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 78.0
  • Bit_score: 95
  • Evalue 1.80e-17
Pilus assembly protein PilZ {ECO:0000313|EMBL:KJC59326.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 78.0
  • Bit_score: 100
  • Evalue 7.60e-19
type IV pilus assembly PilZ similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 78.0
  • Bit_score: 95
  • Evalue 5.00e-18

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Taxonomy

Bradyrhizobium sp. LTSPM299 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
ATGTATGAGCGACGTGCACAGCCGCGGAAACGCGTATTCAAGGCCGGAACGATTGAGTTCGATGGCGTAGGAGTCGATTGCACCGTTCGCAACATCTCCGCCACCGGAGCCGCCCTTGAGGTTGTGAGCCCCCTGACCATTCCCCACGAGATCACGCTGAACATCCGGACCAGCGAGGTACGCCAGCATTGCTACATTGTCTGGCGCAAGGAAAAGCGTATCGGCGTCGCGTTCGGTTAG
PROTEIN sequence
Length: 80
MYERRAQPRKRVFKAGTIEFDGVGVDCTVRNISATGAALEVVSPLTIPHEITLNIRTSEVRQHCYIVWRKEKRIGVAFG*