ggKbase home page

PLM3_60_coex_sep16_scaffold_1229_14

Organism: PLM3_60_coex_sep16_Rokubacteria_71_14

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 10 / 38
Location: 13451..15214

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 620.0
  • Bit_score: 759
  • Evalue 1.60e-216
rpoD; RNA polymerase sigma factor RpoD (Sigma-70) similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 629.0
  • Bit_score: 528
  • Evalue 2.20e-147
Tax=GWC2_Rokubacteria_70_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.6
  • Coverage: 620.0
  • Bit_score: 759
  • Evalue 2.30e-216

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_Rokubacteria_70_16_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1764
ATGAGTGACGAACCGAAGCTGGAAGAGCTGGACCGACTGATCTCGGTGGGCAAGCAGAAGGGCTACCTCACCTACGACGAGGTGAACGACGCCCTCCCGTCGGACATCGTGTCCCTCGACCAACTCGACGACATCATGATGATGTTCGGATCCCTGGACATCGAGGTCGTGGACTCCGCCAAGGCCGGCCGCCTGCCCTCCGAGGTGCGCGCGGCCACGCCGGCTCCGGACGACGACGACGGCGACGGCCCCGAGCCGATCGACCTCACCCCCGGCCCGGTCGGCCGCACCGAGGACCCGGTACGCCTCTACCTGCGCGAGATGGGCCGGGTGGCCCTGCTCACGCGCGAGGGCGAGATCGCGCTGGCCAAGCGGATCGAGGAGGGTAAGAACCAGGTCACCAACGCCATCCTCTCCACCAACCTGGCCCTCGAGCGCTTCCGCGAGCTGCGCGAGTCGCTCCGCCACGGCGACACCTCCGTCAAGGACGTCGTCGACGTCAACGAGGAGGAGTTCACCGAGGACAAGGAGGTCGCGCTCACCCGCCAGGTCGTGAACGCCTTCGGCGGCGTCGATCGGCTCCTGCGCGAGCGCGACCAGCTCCTCGACAAGGTCCGCAAGCTGCGGGCGGCGTCGGCCGGCAAGGGCCGGCGACGGGCGCGCGGCAAGGTCAAGGAGCCGGCCTGGAAGCGGCTGGAGGGTCAGGCCCAGCAGCGGCAGCAGAAGGTCCTGGAGCGGCTGCGCGCGCTGAACATCGGCAACCAGATCATCGACCGCGAGGACGGCGATCCGGCGCGCCGCGGCCTGGTGCAGCGCCTGCGCGACCTGCTCGACGACATCGAGCGCGCCGAGCGCGTGATCCAGCTGTGGACCAACGGGCGCCGGCCGTCGGCCGAAGAGGTCCAGAACCTCATCTACGTCTCCTTCCGCGACCCCGCCTCCGCCCAGGGCACCAACGGCAGCGGCGCCGCCGACCTCCACCTCCGCGCCGCCAAGAAGTTCGCGAGCCCCAAGACCCAGCAGATCTGGGTCGCCCAGCAGGAGATCAAGGCCGCCGAGGTCCGCGCCAACGCCCGCGCCGACGAGATCAAGCGCGTCATGACGATCATCAAGGAGGGCCAGCGCATCGACCTCATCCAGGAAGGCAACATCGGCCTGATGAAGGCCGTGGACAAGTTCGAGTACCGCCGCGGCTACAAGTTCTCCACGTACGCGACGTGGTGGATCCGCCAGGCGATTACCAGGGCCATCGCGGACCAGGCCCGCACGATCCGCATCCCGGTGCACATGATCGAGACGATCAACAAGCTGATCCGCACCTCCCGCCAGCTCGTGCAGGAGCTGGGACGCGAGCCCACGCCGGAAGAGATCGCGACCAAGATGGAGGTGCCGGTCGACAAGGTACGAAAAGTACTGAAAATCGCCCAGGAGCCGATCTCACTGGAAACACCGATCGGAGAGGAAGAGGACAGCCACCTCGGCGATTTCATAGAGGACAAGCAGGTGGTGTCACCGGTGGAGTCGATCATCAGCCTGTCGTTGCGCGAGCAGACCAACAAGGTCCTCAACTCGCTGACGCCGCGCGAGGAGAAGGTGCTGCGCCTGCGCTTCGGCCTGTCCGACGGCTGCGAGCACACGCTCGAGGAGGTCGGCCAGGACTTCGCCGTGACCCGCGAGCGTATCCGGCAGATCGAGGCCAAGGCGCTGCGAAAGCTCCGTCACCCGTCCCGCTCCAAGAAGCTCCGGAGCTTCCTGGAGTCCTGA
PROTEIN sequence
Length: 588
MSDEPKLEELDRLISVGKQKGYLTYDEVNDALPSDIVSLDQLDDIMMMFGSLDIEVVDSAKAGRLPSEVRAATPAPDDDDGDGPEPIDLTPGPVGRTEDPVRLYLREMGRVALLTREGEIALAKRIEEGKNQVTNAILSTNLALERFRELRESLRHGDTSVKDVVDVNEEEFTEDKEVALTRQVVNAFGGVDRLLRERDQLLDKVRKLRAASAGKGRRRARGKVKEPAWKRLEGQAQQRQQKVLERLRALNIGNQIIDREDGDPARRGLVQRLRDLLDDIERAERVIQLWTNGRRPSAEEVQNLIYVSFRDPASAQGTNGSGAADLHLRAAKKFASPKTQQIWVAQQEIKAAEVRANARADEIKRVMTIIKEGQRIDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKLIRTSRQLVQELGREPTPEEIATKMEVPVDKVRKVLKIAQEPISLETPIGEEEDSHLGDFIEDKQVVSPVESIISLSLREQTNKVLNSLTPREEKVLRLRFGLSDGCEHTLEEVGQDFAVTRERIRQIEAKALRKLRHPSRSKKLRSFLES*