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PLM3_60_coex_sep16_scaffold_20059_6

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_8

near complete RP 40 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38 MC: 2
Location: comp(3070..3519)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE6C0 similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 130.0
  • Bit_score: 109
  • Evalue 2.20e-21
XRE family transcriptional regulator {ECO:0000313|EMBL:KGI80232.1}; species="Bacteria; Actinobacteria; Actinopolysporales; Actinopolysporaceae; Actinopolyspora.;" source="Actinopolyspora erythraea.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.3
  • Coverage: 93.0
  • Bit_score: 107
  • Evalue 1.50e-20
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 88.0
  • Bit_score: 102
  • Evalue 5.90e-20

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Taxonomy

Actinopolyspora erythraea → Actinopolyspora → Actinopolysporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 450
GTGACCCAGCCCGTGGAGTACATGTCGGTCGGCGAGCGCATCGCCATCTACCGTCGCCGGCGTGGCCTGTCCCAACTCGCCCTGGCCAACATGATCGGCCGGTCGGAAGCATGGCTGAGCCAGGTCGAGCGTGGCATCCGCCACGTCGACCGGGTGTCGGTGCTCATCAGGCTCGCGCAGGTCCTGAAGGTCACGGTCGAGGACCTGATCGGCCAGCCGTTGTCCCTGGCGCCCAACGGCGGCATTGAGTTCCGCGCGATCCCCGCGCTGCGGGCGGCATTGACCGACTATGAGCTGATCCCGGGGGCGACGGCCCGACCCGGGACCTGCCGAGCCTACGGCGCAATGTCGACCAGGCGAATCGTCTCTATCAGGCGGCCCACTATGAAGAGGCCGGCCTGCTGTGCTCCCGACTCATCGGTGAGGCGCAGCGTGCAACTCGTGAGCTGA
PROTEIN sequence
Length: 150
VTQPVEYMSVGERIAIYRRRRGLSQLALANMIGRSEAWLSQVERGIRHVDRVSVLIRLAQVLKVTVEDLIGQPLSLAPNGGIEFRAIPALRAALTDYELIPGATARPGTCRAYGAMSTRRIVSIRRPTMKRPACCAPDSSVRRSVQLVS*