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PLM3_60_coex_sep16_scaffold_360_28

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(28664..29158)

Top 3 Functional Annotations

Value Algorithm Source
Tetratricopeptide repeat protein Tax=Streptomyces ipomoeae 91-03 RepID=L1L555_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 52.4
  • Coverage: 143.0
  • Bit_score: 130
  • Evalue 1.00e-27
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EKX67924.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.4
  • Coverage: 143.0
  • Bit_score: 130
  • Evalue 1.40e-27
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 153.0
  • Bit_score: 122
  • Evalue 6.00e-26

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Taxonomy

Streptomyces ipomoeae → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 495
ATGGAGTTCAAGGTCCTTGGACCACTCGAGGTCGTCCACCGGGGCTATCCCCTCCCCCTTGGCGGTTCCAAGCAGCGCGCGCTGCTCGCGGTGCTGCTGCTGCACGCGGGCGAGGTCGTCCCGGCCGACCGGCTGATCGAGGACCTGTGGGGCGAGGCGCCACCGGCGACCGCGGCCCACGCGGTCCAGGTGTACGTGGCCGGTCTCCGCAAGCTCCTCGAGCCGGACCGGGCCAAGGGCACGCCGAGCACGTCCCTGCGCACCCGGGCCCCCGGCTACCTCATCGAGGTCGGCGACGACGAGCTCGACCTGGCCCGTTTCGAGCGCCTGGCCGCCGCCGGCCGCTCCATGCTGGCCGCCGACCCGACGCGGGCCGCCGCCCTGCTCCGCGAGGCGCTGCCGATCTCGCCGCCCACCGGCACGCCGACCTGGTGGGTGAGCTCGAGCGCCTGGTCGCCGCCCACCCCCTGCGGGAACGGCTGTGGGGCCAGCTGA
PROTEIN sequence
Length: 165
MEFKVLGPLEVVHRGYPLPLGGSKQRALLAVLLLHAGEVVPADRLIEDLWGEAPPATAAHAVQVYVAGLRKLLEPDRAKGTPSTSLRTRAPGYLIEVGDDELDLARFERLAAAGRSMLAADPTRAAALLREALPISPPTGTPTWWVSSSAWSPPTPCGNGCGAS*