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PLM3_60_coex_sep16_scaffold_815_23

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 27243..30179

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E homolog {ECO:0000313|EMBL:CAJ60572.1}; EC=3.1.4.- {ECO:0000313|EMBL:CAJ60572.1};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.6
  • Coverage: 1096.0
  • Bit_score: 652
  • Evalue 8.40e-184
Ribonuclease, Rne/Rng family Tax=Frankia sp. CN3 RepID=G6HKZ7_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 42.7
  • Coverage: 1070.0
  • Bit_score: 658
  • Evalue 8.40e-186
ribonuclease E-like protein similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 1096.0
  • Bit_score: 652
  • Evalue 1.70e-184

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Taxonomy

Frankia alni → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2937
ATGGCTTCCCCCGACGAGTCGCGGGTCGACGAGGCACGCGACCAATCGGGCGCACCCGCGTCGCCCGACCCCACGACCAATGATCCCGCCGCATCCCCGCCGCGCCTGAACGGCGGCTCCGCGGCCGACGAGCCCAGCGAGGCGGTCTCGCCGGGCCGCCCGCGCGGGACCGCCTCGTTCCCGGGCGGGGCGCCGCCCGTCACCACCGCACCGGCGGAGGTCGCCGTCCCGAGCGCCCCGCCGACCCTCGCCGCTCCCGCCCACTTCCGCGTCACCACCGTCGAGCCGACCTCCGCCTCGTTCCCCGGCGGCCCCCCACCCCCCGCCCCACCCGAGAGCGCCCCGCCACCAACCCCCCCCACGGAGCCCCAACCAACCACCATGTACCCAGACGGCGCCACCCCGCCACCCCCGCCCGCGCCGGCGACCGACGCCTCCGCGCCAAGCGCGCCCGCGCCGGCGACCGATGCCTCCGCCGCGACCCCGGTCGCGCCGGTGACCGACGCCTCCGCTGCGACCCTGCCCGCTCCCGACGTGGAATCGGCGGGTGGGTCGGCTCCGCCCACGCCAGCCGTGGACCAGGCGGGTGGGTCGGGTCCGGCCGCGCCAGCCGTGGACCAGGCGGGTGGGTCGGGTCCGGCCGCGCCGGCCGTGGACCAGGCGCGCGGGTCGGGCGAGGTTGCGCCGGATGTGGTCGAGCCGGAGCGGGCAGGCGTGCCGGCCGATGGCCCGCCAGAGGGGGCTGGGACCGAGGCCGACGTGGCCGAGGGCGCGGGTGGCCGGACAGGTGGGCGGCGGCGGCGTCGAGGGCGTGGCGGAAGGGCCACGGCCACGGCCGAACCCGTCGCCGAGCCCGCCGGGCCAGAGCCGGCCGCACCCGACGCGACCCGGCCAACGCCCGACGAGGCCGCCGAGGCGAACGCCGCGCTGGCCACCTCCGGGCGGCGGGCCGCCGGAGCGGGGCTGGAGGACGACGCGGAGCCTGACGGCGACGGCGCCAAGGGCCGCGAGGACGTGGCCATGTCCCCTGCGGGTTCGGCCCGGACCAGGGCGCGCCGGCGACGGCGGGCCGCCGCCAAGGGCCGCACCCGCGACGGGAGCGCCGACGCGCCGATCGCCGCGCCGGCCGCCGCGCCGGCTCGCGGCTCCCGCTCCGCCAGCCAAGCCGCCGGCGAGCCAACCGCCGGTGCCGACGACCAGCCGGCCAGCCGCCGCGGCCGGCGGGCCGCGCCGCCCGCGGAGCTCCCGGCCGACGCGACTCAGGGGCCGGACGAGGCGGCACCCGCCGCCCGGGCAGGCTCCCGGACGTCCCGCCGGGGTACCGCGGCGGCCGCCAGGGCGGCCACGCCCGAACCGGGCGCCGCCAACGGCGAGACGGCCGCGGAGCCCGGCGCCGCTCGGCCTGCGGAGCCACAGCCCGGCCGCGGCGCGAACCGCGAGACGACCGCTGCCGGCACCACGAGCGAGCGCGGCAGCGGCCGCACCCGGCGGCGGGGCCGCGGCCGGGCGGCCGCCGCCAAGGACGACACGGCCACCGCGGCGGCGGCGCCCGAGGCGGCGCCCACCCGACCCGCCGCGACCGAGCGCTCCACCCGCCTGGAGACCCGCGGCCGCAGCGGCCGCCAGGCCGACCGCGGCCGCCGGCGTCCCCGCGGCCTGACCGAGGAGCAGAAGCGCGTCCTCCGCGAGGAGGGCCCCGACAAGCGGATGCTGGTCACCGAGGGCGCCGAGCGGACCCAGATCGGCGTGCTCGAGGGCCAGACCCTGGTCGAGCACTACGTCACCCGCAAGGCCGGTCGCTCCATGGTCGGCAACATCTACCTCGGCCGGGTCCAGAACGTCCTGCCAGGCATGGAGGCCGCCTTCATCGACATCGGCCGGGGACGCAACGCGGTCCTGTACGCCGGCGAGGTCAACTACAGCGAGGAGGACCTGGACGGCGAGGCACCCCGCATCGAGAGGGTGCTCAAGGCGGGCCAGCCGGTCCTCGTCCAGGTCACCAAGGACCCCATCGGCGCCAAGGGCGCCCGGCTGACCGCCCAGGTCTCCCTCGCCGGCCGCTACCTGGTCCTGCAGCCGGAGGACAACACCTTCGGCATCTCCCGGCGGCTCCCCGAGGAGGAGCGGTCGCGCCTTCGGGACATCCTCAAGGAGGTGCGACCGAAGGGCCTCGGCCTGATCGTCCGCACCGCCGCCGAGGGGGCCAGCGCCGACGACCTCCGCGCCGACCTCGCCCGCCTGCAGGCCCGCTGGGAGGGGGTCGAGCGCAAGGCCAAGAAGGCCAGCGCCCCGGCCGCCATCTACTCCGAGCCGGAGCTGGTCGTCCGCGTCATCCGCGACGTCTTCTCACCCGACTTCGCCGAGCTGGTGGTCGACGACGACGAGCTGTACCAGCGTGTCCACGAGTACCTGGAGGAGGTCGCGCCCGACCTGCTGCCCAAGCTCCGCAGGCACGACGGCCCGCTGCCGCTGTTCGAGGACTACCGGGTGGTCGAGCAGATCCACAAGGCGCTCGAGCGCAAGGTGTGGCTGCCCTCCGGCGGCTCCATCGTGATCGACCGCACCGAGGCGATGACGGTGATCGACGTCAACACGGGCAAGTTCGTCGGCAGGGCGAACCTGGAAGAGACCGTGGTGGCCAACAACCTTGAGGCGGCCGACGAGGTCGTGCGCCAGCTCCGCCTGCGCGACATCGGCGGCATCATCATCATCGACTTCATCGACATGCTGTTCGAGCGCAACCAGCAGGCGGTGGTCGACCGCCTGCGTGACGCCCTGACCCGCGACAAGACCAAGAGCCAGGTGATGGAGGTCTCCTCGCTGGGCCTGGTCCAGATGACCCGCAAGCGCGTCTCCGGCGGCCTGCTCGACACCTTCTCGGAGACCTGCCCGACCTGCGACGGCCGCGGCGTGGTGATCACCCACGAAATCCAGTAA
PROTEIN sequence
Length: 979
MASPDESRVDEARDQSGAPASPDPTTNDPAASPPRLNGGSAADEPSEAVSPGRPRGTASFPGGAPPVTTAPAEVAVPSAPPTLAAPAHFRVTTVEPTSASFPGGPPPPAPPESAPPPTPPTEPQPTTMYPDGATPPPPPAPATDASAPSAPAPATDASAATPVAPVTDASAATLPAPDVESAGGSAPPTPAVDQAGGSGPAAPAVDQAGGSGPAAPAVDQARGSGEVAPDVVEPERAGVPADGPPEGAGTEADVAEGAGGRTGGRRRRRGRGGRATATAEPVAEPAGPEPAAPDATRPTPDEAAEANAALATSGRRAAGAGLEDDAEPDGDGAKGREDVAMSPAGSARTRARRRRRAAAKGRTRDGSADAPIAAPAAAPARGSRSASQAAGEPTAGADDQPASRRGRRAAPPAELPADATQGPDEAAPAARAGSRTSRRGTAAAARAATPEPGAANGETAAEPGAARPAEPQPGRGANRETTAAGTTSERGSGRTRRRGRGRAAAAKDDTATAAAAPEAAPTRPAATERSTRLETRGRSGRQADRGRRRPRGLTEEQKRVLREEGPDKRMLVTEGAERTQIGVLEGQTLVEHYVTRKAGRSMVGNIYLGRVQNVLPGMEAAFIDIGRGRNAVLYAGEVNYSEEDLDGEAPRIERVLKAGQPVLVQVTKDPIGAKGARLTAQVSLAGRYLVLQPEDNTFGISRRLPEEERSRLRDILKEVRPKGLGLIVRTAAEGASADDLRADLARLQARWEGVERKAKKASAPAAIYSEPELVVRVIRDVFSPDFAELVVDDDELYQRVHEYLEEVAPDLLPKLRRHDGPLPLFEDYRVVEQIHKALERKVWLPSGGSIVIDRTEAMTVIDVNTGKFVGRANLEETVVANNLEAADEVVRQLRLRDIGGIIIIDFIDMLFERNQQAVVDRLRDALTRDKTKSQVMEVSSLGLVQMTRKRVSGGLLDTFSETCPTCDGRGVVITHEIQ*