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PLM3_60_coex_sep16_scaffold_1388_6

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: 6497..7117

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9SZ39_MICAI similarity UNIREF
DB: UNIREF100
  • Identity: 51.6
  • Coverage: 188.0
  • Bit_score: 161
  • Evalue 8.90e-37
sigma-70 family RNA polymerase similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 188.0
  • Bit_score: 161
  • Evalue 2.50e-37
Tax=RBG_16_RIF_CHLX_70_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.3
  • Coverage: 157.0
  • Bit_score: 209
  • Evalue 2.30e-51

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Taxonomy

RBG_16_RIF_CHLX_70_13_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 621
GTGTGCGAGACCCAGTCCGTGGAGGGCCGACCACTGGACGACCAGGAGCTCGTCGAGCAGGCACGAGGGGGCGATGCGCGTGCCTACGAGGCGCTGGTGCGCCAGTACCAGGACCTGGCCTTCCGGACGGCCTACGTGATCGCCGGGAGCGCCGCCGACGCCGAGGACGCGGCGCAGGAGGGGTTCGTGAAGGCCTGGTATGCCCTGTCGCGGTTCCGGGTCGGGGCGGCGTTCCGGCCCTGGCTGCTGACGATCGTCGCCAACGAGGCCCGTAACCGCCGCCGTTCCGGCCGCCGCCAGGACGACCTCGCGCTGCGGGTCGCCGAGGACCGCCCCTCGGGGGACGCGGCCCCGTCCCCCGAGGCGGCGGCGCTCGCCGCCGAGCAGCGCCGGCTGCTGCTGGCCGCGGTCGGGCGCCTGGGCGAGTCGGACCGCCAGGTGATCGCCTGCCGCTACTTCCTCGACCTCTCGGAGGCCGAGATGGCCGGCGCGCTCGGCTGCCGCCCGGGAACGGTGAAGTCGCGGCTGTCGCGGGCGCTCGGCCGCCTGCGGGCGGCCATGGCCGAGCAGGCCAACGGCGGGGCGCCGCCGCTCACCAGGCTGCAGGGAGGCGGGGAATGA
PROTEIN sequence
Length: 207
VCETQSVEGRPLDDQELVEQARGGDARAYEALVRQYQDLAFRTAYVIAGSAADAEDAAQEGFVKAWYALSRFRVGAAFRPWLLTIVANEARNRRRSGRRQDDLALRVAEDRPSGDAAPSPEAAALAAEQRRLLLAAVGRLGESDRQVIACRYFLDLSEAEMAGALGCRPGTVKSRLSRALGRLRAAMAEQANGGAPPLTRLQGGGE*