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PLM3_60_coex_sep16_scaffold_2214_20

Organism: PLM3_60_coex_sep16_Actinobacteridae_Actinomycetales_73_16

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 12 / 38 MC: 3
Location: comp(15129..15968)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002627AAF similarity UNIREF
DB: UNIREF100
  • Identity: 51.3
  • Coverage: 269.0
  • Bit_score: 272
  • Evalue 3.70e-70
Putative DNA-binding protein in cluster with Type I restriction-modification system {ECO:0000313|EMBL:EWC61393.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.7
  • Coverage: 262.0
  • Bit_score: 273
  • Evalue 3.00e-70
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 274.0
  • Bit_score: 267
  • Evalue 2.60e-69

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Taxonomy

Actinokineospora spheciospongiae → Actinokineospora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 840
GTGCGCCAGCGGCGGCTCGCAAGGATCTTGCGGAGCCTCCGCGAAGGCGCCGGTCTCACCATCGAGCAGGTAGCGGAGAAGCTCGAGCTGTCTCCGTCCACGATCTCCCGCATGGAAACCGCGCATGTCGGGGTGCGGACCAACGACCTGCGCCCACTGCTGGACATCTACAAGGTCACCGGCATGCGGCGCGACGAGCTGCTGCAGCTCGCGCGAGAGCGCCGCCAGCAGGTCTGGTGGCAGGACTACAAGGACCTGCCGACCGCAGCGGTAGCCAGCCTCGAGACCGAGGCCGCCTCCATCTCGCAGTACGCCGCGCAGGTGATCCCCGGTCTTCTCCAGACCGAGGCGTACGCCCGCACGGTCCTCCGAGCCGTTCACTTTCAGGCCAGCCCCGAGGAGATCGCACGACGACTCAAGCTCCGCGTCGCACGGCAGACGTTGCTCACCGATGCGAAGGCGCCGCAGTACTGGATCGTCATCGACGAGGCGGCCCTGCGGCGAGCCATCGGCGGGCGGCCGGTCATGCACGCGCAGCTCCAGCGTCTGATCGACGCCGCTGCGCTGCCGAGCGTGACCCTGCAGGTGCTCCCGTTTGCCGCCGGCGCCCATGCCGGCCTCGACGGCGAGTTCACCGTCCTCAGCTACCGCGACCCTGCGGACCCCGACGTGGTCTTCATCGAGAACACCGGGGGCGATGCGTATATCGAGAACCTCGACGTGACCCGGCGATACAACTCGATCTTCGATCACCTGCGGGCGGCGGCGCTGAACCCGGCCGAGTCCAGCCGGACCTTGGCCGTTGTCGAGCACGAGCTACTGGAAGCAGAAAGGAGCTGA
PROTEIN sequence
Length: 280
VRQRRLARILRSLREGAGLTIEQVAEKLELSPSTISRMETAHVGVRTNDLRPLLDIYKVTGMRRDELLQLARERRQQVWWQDYKDLPTAAVASLETEAASISQYAAQVIPGLLQTEAYARTVLRAVHFQASPEEIARRLKLRVARQTLLTDAKAPQYWIVIDEAALRRAIGGRPVMHAQLQRLIDAAALPSVTLQVLPFAAGAHAGLDGEFTVLSYRDPADPDVVFIENTGGDAYIENLDVTRRYNSIFDHLRAAALNPAESSRTLAVVEHELLEAERS*