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PLM3_5_b1_sep16_scaffold_38_4

Organism: PLM3_5_b1_sep16_Acidothermus_cellulolyticus_64_13

near complete RP 49 / 55 MC: 2 BSCG 48 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 3567..4505

Top 3 Functional Annotations

Value Algorithm Source
Probable DNA repair protein CMN_02035 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5BBP4_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 64.3
  • Coverage: 322.0
  • Bit_score: 412
  • Evalue 3.30e-112
putative DNA repair protein similarity KEGG
DB: KEGG
  • Identity: 64.3
  • Coverage: 322.0
  • Bit_score: 412
  • Evalue 9.50e-113
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. nebraskensis NCPPB 2581.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.3
  • Coverage: 322.0
  • Bit_score: 412
  • Evalue 4.70e-112

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Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGAGAGCCCTGTGGAAGGGAGCCATCACATTCGGCCTGGTGAATGTGCCGATCAAGCTCTACGCCGCGACCGAGGACCACGACGTCGGCCTCCATCAGGTACACGATGCCGATGGCGGACGGATCCGCTACGAACGGCGGTGTGAGGTGTGCGGCAAGGTGGTCGAGTACGCCCACATCGACAAGGCGTACGCGGACGGCAAGACCACTGTGGTCCTGACCGAAGACGACCTCAAGTCGCTGCCGGAGGAGCGCAGCAAGGAGATCGAGGTCGTGGAGTTCGTGCCATCGGAGCAAATCGATCCGATCATGTTCGATCGCAGCTACTTCTTGGAGCCGGAGAAGCCAGCCGGCAAGGCGTACGCTCTCCTTCGGCGCGCCCTGGAAGAGACTGATCGGACAGCGGTGGTGCAGTTTTCGCTCCGGCAGAAGACCCGGCTTGGAGCGCTGCGGTCCCGCGGAAAGGTGCTGATGCTGCAGTCACTGCTGTGGGATGACGAGGTGCGGGAGGCTGATTTCTCGATCCTCAAGGAGGACGTAGGGGTCTCGCCTCAGGAGCTCAAGATGGCGTCGTCACTGATCGACAACATGGCCGCCGACTTCACCCCCGACAAGTTCAGCGATGAGTACCAAGATCAATTGCGACAGCTGATCGCCGCCAAGCTGGAGAAGGGGGATGCCGTCGACACGGCCGCCACCTTCGGCGAGGAAGGCGAAGAGCAGGCCGACCGTGGGGAAGTGGTCGACCTGATGGAGGCACTGCGACGCAGCGTCGAGCAGAACCGCGCTGCCCGGAAAGCGGCGGAGACCAAGCCCTCAGCCAAGAAGGCTGCGGCGAAGAAGGCCCCGGCTAAGAAGTCGGCGGCCAAGAAAGCCCCGGCTAGGAAGGCATCGGCCAAGAAGGCAACGACAGCGAAGTCAGCCAAGAAGGCCAGTTGA
PROTEIN sequence
Length: 313
MRALWKGAITFGLVNVPIKLYAATEDHDVGLHQVHDADGGRIRYERRCEVCGKVVEYAHIDKAYADGKTTVVLTEDDLKSLPEERSKEIEVVEFVPSEQIDPIMFDRSYFLEPEKPAGKAYALLRRALEETDRTAVVQFSLRQKTRLGALRSRGKVLMLQSLLWDDEVREADFSILKEDVGVSPQELKMASSLIDNMAADFTPDKFSDEYQDQLRQLIAAKLEKGDAVDTAATFGEEGEEQADRGEVVDLMEALRRSVEQNRAARKAAETKPSAKKAAAKKAPAKKSAAKKAPARKASAKKATTAKSAKKAS*