ggKbase home page

PLM3_5_b1_sep16_scaffold_2053_4

Organism: PLM3_5_b1_sep16_Actinobacteridae_Actinomycetales_73_13

near complete RP 41 / 55 MC: 3 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 3
Location: 2360..2731

Top 3 Functional Annotations

Value Algorithm Source
Putative DNA-binding protein Tax=mine drainage metagenome RepID=E6PD65_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 57.6
  • Coverage: 118.0
  • Bit_score: 131
  • Evalue 3.40e-28
Putative DNA-binding protein {ECO:0000313|EMBL:CBH74400.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.6
  • Coverage: 118.0
  • Bit_score: 131
  • Evalue 4.80e-28
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 129.0
  • Bit_score: 117
  • Evalue 2.50e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 372
ATGAACGACCCATGGAAGTCGCAGATGGAGGCCCTCGGCTCCTTCATCCGGACCCAGCGCAAGCTGGCCGACCTGTCGCTGCGCGAGCTGGCCGAGATGACCGAGGTCTCCAACCCCTACCTGAGCCAGCTGGAGCGGGGCCTGCACCAGCCGTCGGTCCGGGTGCTCAAGTCGATCGCCAACGCCCTCAACGTGTCCGCCGAGACCCTGCTCGTCCAGGCGGGCCTGCTGGAGGACGGCGTCGAGGGCGACCCGGCCGCCGGTTCGTCGGTCGAGGTGGCCATCCGCACCGACCCGGTCCTGTCCAGCGACCAGAAAGAGGCCCTGATCAACGTGTACCGGGCCATGGCGCACGACCGCCGCTCCGGCTGA
PROTEIN sequence
Length: 124
MNDPWKSQMEALGSFIRTQRKLADLSLRELAEMTEVSNPYLSQLERGLHQPSVRVLKSIANALNVSAETLLVQAGLLEDGVEGDPAAGSSVEVAIRTDPVLSSDQKEALINVYRAMAHDRRSG*