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PLM3_30_b1_sep16_scaffold_2360

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_2360_1
unknown

Not on your lists

120..278
-----------------
DNA (159bp)
protein (53aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2360_2
unknown

Not on your lists

415..633
-----------------
DNA (219bp)
protein (73aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2360_3
unknown

Not on your lists

758..955
-----------------
DNA (198bp)
protein (66aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2360_4
unknown

Not on your lists

comp(989..1288)
-----------------
DNA (300bp)
protein (100aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2360_5
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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comp(1300..2136)
-----------------
DNA (837bp)
protein (279aa)
Uncharacterized protein Tax=Nitrosospira sp. APG3 RepID=M5DQ87_9PROT
Restriction endonuclease EcoRI subunit R {ECO:0000313|EMBL:KIJ72299.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2360_6

Not on your lists

comp(2384..3016)
-----------------
DNA (633bp)
protein (211aa)
Tyrosine recombinase XerC Tax=Geobacter sp. (strain M21) RepID=C6DZI5_GEOSM
Uncharacterized protein {ECO:0000313|EMBL:KKN24085.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
tyrosine recombinase XerC
PLM3_30_b1_sep16_scaffold_2360_7
unknown

Not on your lists

3129..3722
-----------------
DNA (594bp)
protein (198aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2360_8
unknown

Not on your lists

5016..5282
-----------------
DNA (267bp)
protein (89aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2360_9
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(5224..8943)
-----------------
DNA (3720bp)
protein (1240aa)
Na-Ca exchanger/integrin-beta4 Tax=Gemmata obscuriglobus RepID=UPI00016C382F
VCBS repeat-containing protein
Conserved repeat protein {ECO:0000313|EMBL:AGA29910.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM3_30_b1_sep16_scaffold_2360_10
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

comp(9165..11525)
-----------------
DNA (2361bp)
protein (787aa)
Serine/threonine protein kinase Tax=Pedosphaera parvula Ellin514 RepID=B9XAQ6_9BACT
serine/threonine protein kinase
Tax=RBG_16_Aminicenantes_63_16_curated
PLM3_30_b1_sep16_scaffold_2360_11

Not on your lists

comp(11543..11797)
-----------------
DNA (255bp)
protein (85aa)
Serine/threonine protein kinase with TPR repeats Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029S4_SOLUE
Marine sediment metagenome DNA, contig: S12H4_S04904 {ECO:0000313|EMBL:GAI93645.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
serine/threonin protein kinase
PLM3_30_b1_sep16_scaffold_2360_12
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(11915..12481)
-----------------
DNA (567bp)
protein (189aa)
RNA polymerase sigma factor, TIGR02999 family Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DL66_SINAD
RNA polymerase sigma factor
RNA polymerase sigma factor, TIGR02999 family {ECO:0000313|EMBL:AGA29593.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM3_30_b1_sep16_scaffold_2360_13
unknown

Not on your lists

12668..13081
-----------------
DNA (414bp)
protein (138aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2360_14
unknown

Not on your lists

13345..13770
-----------------
DNA (426bp)
protein (142aa)
hypothetical protein
PLM3_30_b1_sep16_scaffold_2360_15

Not on your lists

comp(14340..15404)
-----------------
DNA (1065bp)
protein (355aa)
WD repeat-containing protein Tax=Schlesneria paludicola RepID=UPI00029B3A83
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49222.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
WD40 repeat-containing protein
PLM3_30_b1_sep16_scaffold_2360_16
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

15664..16086
-----------------
DNA (423bp)
protein (141aa)
CopY family transcriptional repressor Tax=Schlesneria paludicola RepID=UPI00029AEFBB
CopY family transcriptional regulator
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
PLM3_30_b1_sep16_scaffold_2360_17
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

16083..17732
-----------------
DNA (1650bp)
protein (550aa)
antirepressor regulating drug resistance protein Tax=Schlesneria paludicola RepID=UPI00029A40BE
BlaR1 peptidase M56 family membrane protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
PLM3_30_b1_sep16_scaffold_2360_18
unknown

Not on your lists

comp(17952..18221)
-----------------
DNA (270bp)
protein (90aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2360_19
unknown

Not on your lists

18612..18773
-----------------
DNA (162bp)
protein (54aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2360_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19414..19722
-----------------
DNA (309bp)
protein (103aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG87950.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3_30_b1_sep16_scaffold_2360_21
unknown

Not on your lists

19735..19962
-----------------
DNA (228bp)
protein (76aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2360_22
unknown

Not on your lists

20080..20475
-----------------
DNA (396bp)
protein (132aa)
hypothetical protein Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B2F8FB
PLM3_30_b1_sep16_scaffold_2360_23
unknown

Not on your lists

20661..21125
-----------------
DNA (465bp)
protein (155aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2360_24
unknown

Not on your lists

21344..21886
-----------------
DNA (543bp)
protein (181aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2360_25
unknown

Not on your lists

22180..22314
-----------------
DNA (135bp)
protein (45aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_2360_26
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(22311..23732)
-----------------
DNA (1422bp)
protein (474aa)
Protein containing DUF1501 Tax=Rhodopirellula europaea SH398 RepID=M5S734_9PLAN
Protein containing DUF1501 {ECO:0000313|EMBL:EMI27290.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula europaea SH398.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_2360_27
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(23741..25294)
-----------------
DNA (1554bp)
protein (518aa)
Uncharacterized protein Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R2M4_ISOPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV62524.1}; Flags: Precursor;; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
Displaying 27 items

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