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PLM3_30_b2_sep16_scaffold_131_28

Organism: PLM3_30_b2_sep16_Verrucomicrobia_Verrucomicrobiales_62_7

near complete RP 51 / 55 MC: 3 BSCG 48 / 51 ASCG 13 / 38
Location: comp(35097..35702)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B2A0B1_OPITP similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 182.0
  • Bit_score: 212
  • Evalue 2.50e-52
Marine sediment metagenome DNA, contig: S06H3_L01139 {ECO:0000313|EMBL:GAI17581.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 186.0
  • Bit_score: 213
  • Evalue 2.10e-52
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 182.0
  • Bit_score: 212
  • Evalue 7.10e-53

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Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 606
GTGAGCGACGTGACCCGCATCCTTGAAGCAGTTCAACAAGGCGATCCCGCGGCGGCGAAAGACCTGTTGCCACTGGTCTATGAAGAGTTGCGCCGATTGGCCCGTTCGAAAATGGCTCAGCAAGCCGGCGGGCACACCCTTCAGCCGACCGCGCTCGTGCATGAAGCCTGGCTGCGGCTGGTCGGCTCCGAGCGGCAGGAGTGGCACGGACGGAGCCACTTCTTTGCCGCGGCGGCCGAAGCGATGCGTCACATCCTGGTGGACAGCGCCCGGCGCAAACGCCGCGGCAAACACGGTGGTGGTCAGGAACGCGTGGACGTGGACGAAATCGACATCGCCGCGGGAATGGATGACGAGAAGATTTTATTGGTTCACGAGGCGCTGGAAAAGCTGACGATGGAAGATCCCATTCGCGCCGAGGTCGTGAAGCTGCACTATTTCGTGGGCCTGACCCACGCCGAATCGGCCGAGATTCTGCAGATCTCCGAGAAAACCGTGCGCCGTCATTGGAACTACGCCCGGGTGTGGCTGTATCAAACCATTCAGTCCGCAGACCAACCCAACGCTCTCCACTCGGGCAACCAGCCGCACGCGCCTTCGGAGTAG
PROTEIN sequence
Length: 202
VSDVTRILEAVQQGDPAAAKDLLPLVYEELRRLARSKMAQQAGGHTLQPTALVHEAWLRLVGSERQEWHGRSHFFAAAAEAMRHILVDSARRKRRGKHGGGQERVDVDEIDIAAGMDDEKILLVHEALEKLTMEDPIRAEVVKLHYFVGLTHAESAEILQISEKTVRRHWNYARVWLYQTIQSADQPNALHSGNQPHAPSE*