ggKbase home page

PLM1_5_b1_sep16_scaffold_1706_5

Organism: PLM1_5_b1_sep16_Actinobacteria_67_8

near complete RP 44 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: comp(2819..3862)

Top 3 Functional Annotations

Value Algorithm Source
det:DET0596 ligA; DNA ligase, NAD-dependent (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 48.8
  • Coverage: 334.0
  • Bit_score: 314
  • Evalue 8.10e-83
NAD-dependent DNA ligase (EC:6.5.1.2) similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 321.0
  • Bit_score: 308
  • Evalue 2.10e-81
Tax=RBG_16_Actinobacteria_67_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.9
  • Coverage: 324.0
  • Bit_score: 453
  • Evalue 2.00e-124

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Actinobacteria_67_10_curated → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1044
GTGATCAAGGTCGACTCCTTCGACCAGCAGCGCCGCCTCGGTGCGCTGCACGATCGGCCGCGGTGGGCGCGTGCCTTCAAGTGGGCGCCGATGACCGCCCAGACGAAGCTGAACAAGATTCACATCCGAGTCGGAAGAACAGGGGCACTCAATCCCTGGGCACAGCTCGAGCCCGTCGAGGTCGGCGGCGTGACGGTGTCACAGGCGACGCTGCACAACGAGGAAGACATCAACCGCAAGGACATCCGCGAGGGCGACAACGTGATCGTCCAGCGTGCCGGTGACGTGATCCCGCAGGTCGTCGGCCCTGTTCTTCCGCATGTCAAGGGCACGAAGCCCTTCAAGATGCCGAAGAAGTGCCCGCTCTGCGGGGCGGACATCGTCAAGCCGGAGGGCGAGGCGATGCACCGCTGCCCCAACCGTGCCTGTCCGTCTCGTGGGCTCGAGTCGTTGATCAACTGGGTGCAGGCGGCCGCGGACATCGAAGGCGTCGGCGAGCAGTCGGTGCGCCGGCTCTGGGATCTCGGGCTCGTACGCTCGCTGCCGGATCTCTACCAGCTGACGAAGGAACAGCTGATGGAGCTCGAGGGCTACGGCGAGATCTCGGCGACGAACGCGATCGAGTCGATCCAGGCGTCGAAGCAGGTGCCCTTCCACCGTGTCCTGTTCGGCCTGAACATCCCCGACGTCGGCTGGGTGACGGCGCAGAACCTCGCACGTCATTTTGAGAGCGTCGACAAGCTGCTCGAAGCGAAGCAGGAAGACATCCTGGAGGTCGAGGGAATCGGGCCGGAGCGAGCCGAGGCGATTGCGGAGTGGTTCTCGGACGACGCGAACCGCGGGCTCGTCGACGAGCTGCGCCAGCTCGGTTTGCGGTTCGAGATCGGCGACGAGCTCAAGCCGGTCGTGGGACCGCTGACCGGCAACACGTACGTGATCACCGGAACCCTCGAAGCGTTCACGCGCGACGAGGAAGGGCGCCAAGGTCGGGAACGCGGTGTCAGGGAAGACGACCGGGCTGATCGTCGGAGAGGAACCGGGTAA
PROTEIN sequence
Length: 348
VIKVDSFDQQRRLGALHDRPRWARAFKWAPMTAQTKLNKIHIRVGRTGALNPWAQLEPVEVGGVTVSQATLHNEEDINRKDIREGDNVIVQRAGDVIPQVVGPVLPHVKGTKPFKMPKKCPLCGADIVKPEGEAMHRCPNRACPSRGLESLINWVQAAADIEGVGEQSVRRLWDLGLVRSLPDLYQLTKEQLMELEGYGEISATNAIESIQASKQVPFHRVLFGLNIPDVGWVTAQNLARHFESVDKLLEAKQEDILEVEGIGPERAEAIAEWFSDDANRGLVDELRQLGLRFEIGDELKPVVGPLTGNTYVITGTLEAFTRDEEGRQGRERGVREDDRADRRRGTG*