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PLM1_5_b1_sep16_scaffold_4374_4

Organism: PLM1_5_b1_sep16_Actinobacteria_67_8

near complete RP 44 / 55 MC: 3 BSCG 45 / 51 MC: 1 ASCG 10 / 38 MC: 2
Location: comp(2029..2685)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F144_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 208.0
  • Bit_score: 258
  • Evalue 5.60e-66
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 208.0
  • Bit_score: 258
  • Evalue 1.60e-66
Tax=RBG_16_Actinobacteria_68_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 83.2
  • Coverage: 220.0
  • Bit_score: 361
  • Evalue 5.10e-97

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 657
ATGGCCGCACGACCGGCGACCGCCGCGCAGAAGGCCGAAAGAGAGCTCCAGGATCTTCAGCTCGTGATGCGTGCGCGGAACGGCGACAGCGGCGCCCTCGATGCCCTGATCCGCCGCTACACCGGGTTCGTCCGGCTGAAGGCGAGCTCCTACTTTCTCGCCGGCGGCGACTCCGAGGACCTCGTCCAGGAGGGTCTGATCGGGCTCTACAAGGCGGTTCGGGACTTCCGGGCCGACAAGGAGACCTCGTTCAGGAGCTTCGCGGAGCTCTGCGTCACCCGCCAGATCATCACGGCGATCAAGACCGCCACCCGGTTCAAGCACGCGCCCCTGAACACCTATGTCTCCTTCAGCCACACCCCCGCCGGCCAGGAATCGGACAGCGAGTGCACCCTCGGGGACGCTCTCCCGGGGCCGAGCGTGAACGACCCCTCCGTTTGTGTCATTTCCACCGAGGAGCTCCAGAGCCTCGTTTTCACCCTTGGGAGCGGGCTTTCCGAGCTCGAGGCGGACGCCCTCCGGCTCTATCTGGAGGGTGAATCCTACGAGCAGATGGCGGAAGATCTAGGCTGTGACACGAAGACGATCGACAACGCGCTCCAGCGGGTGAAGAGGAAGATTCTCCAGCACCAGAAATCCCGGCAAGTCCTGCTTTAA
PROTEIN sequence
Length: 219
MAARPATAAQKAERELQDLQLVMRARNGDSGALDALIRRYTGFVRLKASSYFLAGGDSEDLVQEGLIGLYKAVRDFRADKETSFRSFAELCVTRQIITAIKTATRFKHAPLNTYVSFSHTPAGQESDSECTLGDALPGPSVNDPSVCVISTEELQSLVFTLGSGLSELEADALRLYLEGESYEQMAEDLGCDTKTIDNALQRVKRKILQHQKSRQVLL*