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PLM1_30_coex_sep16_scaffold_11278_6

Organism: PLM1_30_coex_sep16_Actinobacteria_68_7

near complete RP 43 / 55 MC: 3 BSCG 41 / 51 MC: 2 ASCG 7 / 38
Location: comp(3270..3953)

Top 3 Functional Annotations

Value Algorithm Source
Glycine betaine/L-proline ABC transporter permease and substrate-binding protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U2B6_MYXSD bin=16ft_combo_ws3_JS1 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 48.2
  • Coverage: 222.0
  • Bit_score: 209
  • Evalue 1.80e-51
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 207.0
  • Bit_score: 208
  • Evalue 1.20e-51
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 225.0
  • Bit_score: 328
  • Evalue 3.80e-87

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGCGGCCGCTCGTGGCGGGTGCCGCGCTCGGGGCTCTGCTGCTGCACGGATTCGGCGTCAGCGCCGCACAGGACGGAGTCATCCGTGTCGGGTCGAAGTCCTTCACGGAAAGCTACCTCCTCGCGGAAATCGCGGCACAGGTTATCGAGCAGGCTGGAGAGGCCCGCGTCGAACGGCGGCTCGGCCTCGGCGGCACCGGTATCACCTACCGGGCCATCGCCTCGGGCGCGATCGACCTCTATCCCGAGTACGCGGGCACGCTCGCCCGCATCATCCTGAAGGACCCGGCGCTTCAAACCCCCGAGGCGATCCGCGCGCGCCTCCGGCCATCGGGGCTGACGATGAGCGAGCCCCTCGGCTTCAACAACACGTACGCGCTCGCGGTCCGCGTCGACACCGCCGAGCGTTTGGACCTAAAGAGCATCGGTGACCTCGTGCGTCACCAAGAGCTCACCGCGGCGTTCAGCTCAGGTTTTCTGGAGCGCGAGGACGGCTGGCCGGGACTCAAGCGCCACTACGGCCTGTCGCTGGCTCGCGTACGGGTGATGGAGCACGCCCTGACGTACCGGGCGCTCGCCGGCGGCGAGGTGGATGTCATGGACGTCTTCTCGACGGACGGGCAGCTCGAGCGCCTGCGACTTCGGATCCTCCGGGACGATCGGGGCTTCTTCCCCGGCGCATGA
PROTEIN sequence
Length: 228
MRPLVAGAALGALLLHGFGVSAAQDGVIRVGSKSFTESYLLAEIAAQVIEQAGEARVERRLGLGGTGITYRAIASGAIDLYPEYAGTLARIILKDPALQTPEAIRARLRPSGLTMSEPLGFNNTYALAVRVDTAERLDLKSIGDLVRHQELTAAFSSGFLEREDGWPGLKRHYGLSLARVRVMEHALTYRALAGGEVDVMDVFSTDGQLERLRLRILRDDRGFFPGA*