ggKbase home page

PLM2_5_b1_sep16_scaffold_4473_7

Organism: PLM2_5_b1_sep16_Acidothermus_cellulolyticus_74_11

near complete RP 45 / 55 MC: 1 BSCG 46 / 51 MC: 2 ASCG 13 / 38
Location: comp(5686..6897)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 Tax=Actinopolymorpha alba RepID=UPI000365CAD2 similarity UNIREF
DB: UNIREF100
  • Identity: 73.2
  • Coverage: 396.0
  • Bit_score: 572
  • Evalue 3.30e-160
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:CCH19622.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 396.0
  • Bit_score: 570
  • Evalue 1.00e-159
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 69.9
  • Coverage: 402.0
  • Bit_score: 551
  • Evalue 1.30e-154

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Micromonospora lupini → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1212
ATGACCGACCCGGACGGGGTGGCCCGCGTCTACCGGCACGAGTACGGCCGGTGCGTGGCCACCCTGGTCCGCGTCCTCGGCGACATCGACCTCGCCGAGGAGGCGGTCCAGGAGGCGTTCGCCATCGCCCTGGAGCGGTGGCCGGCCGCGGGCCTGCCGCCGAACCCCGGCGCCTGGATCGTCACCACCGCCCGCAACAAGGCCATCGACCGGATCCGCCGGGAGGCGACCCGCGAGGACAGGCACGCCCAGGCAGCGCTGCTGCACCAGCCCGACGAGCCGCAGGAGGTGGGACCCGTGCGCGACGACCAGCTGCGGCTGATCTTCACCTGCTGCCACCCGTCCCTCGCGCCGGCCGCCCAGGTCGCGCTCACCCTCCGCCTGCTCGGCGGCCTGGAGACCCCGGAGATCGCCCGGGCCTTCCTGGTCCCGGAGTCGACGATGGCGCAGCGGATCGTCCGGGCCAAGCGCAAGATCAAGGACGCGGCGATCCCGTACCGGATCCCGACCGAGGCCCAGCTGCCGGACCGGCTGCCGCCCGTGCTGGCCGTGCTCTACCTGGTCTTCAACGAGGGCTACGCGGCCAGCGCCGGCGAGGACCTGGTTCGCGCCGACCTGTGCGCCGAGTCGATCCGGCTGGTCAGGGAGCTGGCCGGGCTGATGCCGGACGAGCCCGAGGTCGCCGGCCTGCTCGCGCTGCTGTTGCTGACCGAGTCCCGCCGGCCGGCCCGGACCGCGCCGGACGGCACGATCGTGCTGCTGCCCGACCAGGACCGCACGCTGTGGAACCGCGCCCTGATCGCGGAGGGCCAGGCGATCGTGCGCGCCTGCCTGCGCCGCAACCGCCCCGGGCCGTACCAGATCCAGGCGGCGATCGCGGCCGTGCACTCGGACGCGCCGACCGCCGCCGACACCGACTGGGCGCAGATCCTGGCCCTCTACGACCAGCTCACCGCGGTCGCGCCGACCGAGGTGGTGGCGCTGAACCGGGCCGTCGCGGTGGCCGAGCTGCACGGGCCGGCGGCCGGGCTGGCCGAGGTCGACCGGCTGGAGCTGCCCGCGTACCACCTGTTCCACTCGACCAGGGCCGACCTGCTGGTCCGGCTGGGCCGCACCGACGAGGCGGCGGTCGAGTACGAGCGGGCGCTGGAGCTGGCCAGCAACGCGGCCGAGCGGGCCTTCCTGGCCGGCCGGCTCAGCTCCGTCCGCTAG
PROTEIN sequence
Length: 404
MTDPDGVARVYRHEYGRCVATLVRVLGDIDLAEEAVQEAFAIALERWPAAGLPPNPGAWIVTTARNKAIDRIRREATREDRHAQAALLHQPDEPQEVGPVRDDQLRLIFTCCHPSLAPAAQVALTLRLLGGLETPEIARAFLVPESTMAQRIVRAKRKIKDAAIPYRIPTEAQLPDRLPPVLAVLYLVFNEGYAASAGEDLVRADLCAESIRLVRELAGLMPDEPEVAGLLALLLLTESRRPARTAPDGTIVLLPDQDRTLWNRALIAEGQAIVRACLRRNRPGPYQIQAAIAAVHSDAPTAADTDWAQILALYDQLTAVAPTEVVALNRAVAVAELHGPAAGLAEVDRLELPAYHLFHSTRADLLVRLGRTDEAAVEYERALELASNAAERAFLAGRLSSVR*