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ACD43_51_4

Organism: ACD43

megabin RP 43 / 55 MC: 19 BSCG 42 / 51 MC: 12 ASCG 0 / 38
Location: comp(1444..2076)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, RpoE, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 34.6
  • Coverage: 182.0
  • Bit_score: 109
  • Evalue 8.80e-22
coiled-coil (db=Coil db_id=coil from=174 to=195 evalue=NA) iprscan interpro
DB: Coil
  • Identity: null
  • Coverage: null
  • Bit_score: null
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=32 to=192 evalue=7.8e-34 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 7.80e-34

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 633
ATGCGTACCGCTTCACATGATCGACCAAATCTTCGTCTGGTGGAAGGAGTCAGCGATGGGGAACTGATCACAAGATACCGTAGTGGTGACACGGCAGCCTTTAATGCCATAGTACATCGCTACCGCGATTCGCTGACGCGTTATGCTCATAGTATCGTCTCCAATCACGCGCGGGCTGAAGAAATCGTCCAAGAAGCGTTTGCTAAACTGGCGCACAATCAGACGGATGTTCAAGCTGAGGCATTAAAAAGTTGGTTATATAGAGTTGTGCGCAATAGTGCTATAAATGAAAAACGTGACACCAAGCGGCATGCGACACTACATGCCATGCATAATGACGCTTTGCCATTCGGTCAGCGTGATACAAGGTCACCAGAACAACTATTACACGAATTGCTCCAGCAGACGGCGGTTCAGGAACTATTGGATGAATTGTTGAACAAACATGCCGAAGTGCTGCGGTTGCGTTATTTTCAAGATTTGACCAATGAAGAAATCGCCAAAACACTGAAAATACCACTGGGAACGGTAATGTCACGACTGTCTCGAGCAAAACGAGAATTACGAAAACTGATAGAGGAACGTGGGCTCACTACTGACTTTGACGAAGCAGCCCAACGACAAGCCATCTGA
PROTEIN sequence
Length: 211
MRTASHDRPNLRLVEGVSDGELITRYRSGDTAAFNAIVHRYRDSLTRYAHSIVSNHARAEEIVQEAFAKLAHNQTDVQAEALKSWLYRVVRNSAINEKRDTKRHATLHAMHNDALPFGQRDTRSPEQLLHELLQQTAVQELLDELLNKHAEVLRLRYFQDLTNEEIAKTLKIPLGTVMSRLSRAKRELRKLIEERGLTTDFDEAAQRQAI*