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ACD43_105_6

Organism: ACD43

megabin RP 43 / 55 MC: 19 BSCG 42 / 51 MC: 12 ASCG 0 / 38
Location: comp(6519..7019)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 166.0
  • Bit_score: 198
  • Evalue 1.10e-48
seg (db=Seg db_id=seg from=35 to=46) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
SIGMA70_2 (db=PatternScan db_id=PS00716 from=128 to=154 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 501
TCGCGCACCATTCGTATTCCGGTGCATATGGTGGAAACTATCAATAAATTCCAGCAAATTGAACGCGCTTTAATTCAAATTTTAGGGCGTGAACCGTTACCCGAGGAAATTGCCGCCGAAATGGGTGAGGAAATTGAAAAAGTCCACACTATTATTAAAATTTCTCAAGAAACTGTCTCTTTGGAAACTTCGGTCGGTGATGACGAATCGGAAGATTCAACCTTGGGTGATTTTATTGAAGATCAAAAAACCATCTCGCCCGATCGGTCGGCCTCACTCCAGCTGTTAAAAGACCATGTTTACGATATTATTAAAGATCTACCACCGCGCGAACAGAAAATATTGGAAATGCGTTTTGGTTTAATTGATGGCGTGGCTCATACTTTAGAAGAAGTTGGTCAAGAATTTGGGGTGACGCGTGAACGTATTCGGCAAATTGAAGCCAAGGCCTTGGATAAAATTCAATCGCACGTTGGTATGCGTAAATTACGTGATTACTAA
PROTEIN sequence
Length: 167
SRTIRIPVHMVETINKFQQIERALIQILGREPLPEEIAAEMGEEIEKVHTIIKISQETVSLETSVGDDESEDSTLGDFIEDQKTISPDRSASLQLLKDHVYDIIKDLPPREQKILEMRFGLIDGVAHTLEEVGQEFGVTRERIRQIEAKALDKIQSHVGMRKLRDY*