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LAC_NA06_curatedSub20_scaffold_247_2

Organism: LAC_NA06_sub_Chloroflexi_61_22_curated

near complete RP 53 / 55 MC: 2 BSCG 50 / 51 ASCG 10 / 38 MC: 1
Location: 877..2199

Top 3 Functional Annotations

Value Algorithm Source
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00081436}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00081436};; species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Gardnerella.;" source="Gardnerella vaginalis AMD.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.5
  • Coverage: 66.0
  • Bit_score: 59
  • Evalue 8.30e-06
Type II secretory pathway, pullulanase PulA glycosidase Tax=Gardnerella vaginalis AMD RepID=D6SYA1_GARVA similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 66.0
  • Bit_score: 59
  • Evalue 5.90e-06
Na-Ca exchanger/integrin-beta4 similarity KEGG
DB: KEGG
  • Identity: 59.5
  • Coverage: 42.0
  • Bit_score: 57
  • Evalue 1.10e-05

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Taxonomy

Gardnerella vaginalis → Gardnerella → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1323
ATGAAAACGACCTCCCGCCTCCTGACTTTGACCGTCATCCTGGGATTGGCCTACTCGACCTTCGCCTGCGCTCCCCAGCCGACGCCCGTCCCGACTCCCAGCCCCACCCCGGCGACGCCTGCCGCGTCCCCCTCCCCGACGGCGGCCCCCACCCAAACGGCCGTCCCCACCCGCACGCCCACCCCGCGTCCCGATCACACCCGGGCCTTCCTCGACGCGCTGCTCCCCGGCGCGAACAGCTGCCATCCCGACCGTACCGCCGAAGACATCGGCGTCTACATTTATGATTTGACCGACGACCGCGAGCTGGTCTCCGTCAACGCCGACGTCCCCTTCCAATTCGCGTCGGCGTTCAAGGGCCCGGTATTGACCTACTTCCTCTCCTCCTGCCGCGCGTACTGGGACAGTTCCAGCGCGGAGTGGCAGGAACATTTCCAGGATCTGGAGGCCGCGCGCAACATCGAATACTACACCAGCGCGGACTATGAGCAGGCTCTCACGGAATTCCTCTCCGACCCGAAAAATTGGAAAGACGTGGGCGATTTTTCAGCCGAGCGCCGTTACGTCAGCAACGGCCTGGCCGGGGACATTGACACGCGTTATTTCATCCTCGCAAAAATCTACGGGATGATCGCCCAAAGCCGAAACCTCGCGACCGCCGACGCGCTGAAATTCGTCTACGAAAACTGCCTGCCCGCCGAGCATCCCCAAATGGAGGCGGACTGCGGCGGCCCCAACGCGCTGACCTCCTTCAACGCCTGGTTCGACCAATTTACCGGGCTGGCCTATGAAAGCGGCGCGCCGCGCCGCGGACTCTACGAGTGGAATAACGTCGTCGAGAACGCCGCGGACGGCCCGCGGGAGGAGGCGCTTTCCACCAGCGGCCTGACGGACTCCTGCGCCAACCAGTCCGCCGTCCTGAAATGCGACCCGTCGGCCCGCGCCGTCAACACGTACACGGCCCGCGACCTCTTCCAGTTCTACTCCGCCCTGTACCGCCTCGACGATAAGAGGCTGCGCGGCGCGGCCTTCAGCCTGCTGGAATTGGACGAACCCGGCCCGGCGCGCGGCCCGCTCAAAAATCTGACGCGCAGTCTCGGCGCCGTATCGCTCAGCAAGAACGGGCACGCGTTTTATCACAACGGCTCGATCAACGCCGACGCGGGAATCGTGCTTTACAAGGGCAGGGCGTACGTCATCGTCACCCTCTCGTTCAACGCGCTGGAATCCATGAGCCGCTTATATGGGCAATATGACAAAGACGGGAAACCCGCCGGCAAACCGGGGCTGATTCAAAACCTGCTGCAAACCGAAACGCGATAG
PROTEIN sequence
Length: 441
MKTTSRLLTLTVILGLAYSTFACAPQPTPVPTPSPTPATPAASPSPTAAPTQTAVPTRTPTPRPDHTRAFLDALLPGANSCHPDRTAEDIGVYIYDLTDDRELVSVNADVPFQFASAFKGPVLTYFLSSCRAYWDSSSAEWQEHFQDLEAARNIEYYTSADYEQALTEFLSDPKNWKDVGDFSAERRYVSNGLAGDIDTRYFILAKIYGMIAQSRNLATADALKFVYENCLPAEHPQMEADCGGPNALTSFNAWFDQFTGLAYESGAPRRGLYEWNNVVENAADGPREEALSTSGLTDSCANQSAVLKCDPSARAVNTYTARDLFQFYSALYRLDDKRLRGAAFSLLELDEPGPARGPLKNLTRSLGAVSLSKNGHAFYHNGSINADAGIVLYKGRAYVIVTLSFNALESMSRLYGQYDKDGKPAGKPGLIQNLLQTETR*