ggKbase home page

GWB1_scaffold_323

Alias: GWB1_UNK_110322

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
GWB1_scaffold_323_1
Parcubacteria bacterium GW2011_GWB1_56_8, Parcubacteria, Bacteria

Not on your lists

2..88
-----------------
DNA (87bp)
protein (29aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW46124.1}; Flags: Fragment;; TaxID=1618888 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_56_8.;"
GWB1_scaffold_323_2
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

comp(232..933)
-----------------
DNA (702bp)
protein (234aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
Intein-containing protein
GWB1_scaffold_323_3
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

1067..1894
-----------------
DNA (828bp)
protein (276aa)
Cobyrinic acid ac-diamide synthase; K03496 chromosome partitioning protein Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
Cobyrinic acid ac-diamide synthase
Cobyrinic acid ac-diamide synthase
GWB1_scaffold_323_4
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

1902..3008
-----------------
DNA (1107bp)
protein (369aa)
parB; chromosome partitioning protein ParB; K03497 chromosome partitioning protein, ParB family Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
parB; chromosome partitioning protein ParB
Chromosome partitioning protein ParB
GWB1_scaffold_323_5
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

comp(3000..4706)
-----------------
DNA (1707bp)
protein (569aa)
SpoT; guanosine polyphosphate pyrophosphohydrolase/synthetase; K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
SpoT; guanosine polyphosphate pyrophosphohydrolase/synthetase
RelA/SpoT family protein
GWB1_scaffold_323_6
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

comp(4747..6894)
-----------------
DNA (2148bp)
protein (716aa)
DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase
GWB1_scaffold_323_7
Parcubacteria bacterium GW2011_GWB1_56_8, Parcubacteria, Bacteria

Not on your lists

comp(6891..7979)
-----------------
DNA (1089bp)
protein (363aa)
Putative Rossmann fold nucleotide-binding protein {ECO:0000313|EMBL:KKW46828.1}; TaxID=1618888 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_56_8.;"
Smf; Rossmann fold nucleotide-binding protein
Predicted Rossmann fold nucleotide-binding protein
GWB1_scaffold_323_8
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

8005..8448
-----------------
DNA (444bp)
protein (148aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
GWB1_scaffold_323_9
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

8464..8679
-----------------
DNA (216bp)
protein (72aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
GWB1_scaffold_323_10
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

9361..10080
-----------------
DNA (720bp)
protein (240aa)
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
RNA pseudouridine synthase
Pseudouridine synthase
GWB1_scaffold_323_11
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

10216..10848
-----------------
DNA (633bp)
protein (211aa)
alias=gwe2_scaffold_696_67 Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
hypothetical protein
GWB1_scaffold_323_12
Parcubacteria bacterium GW2011_GWB1_56_8, Parcubacteria, Bacteria

Not on your lists

10951..12666
-----------------
DNA (1716bp)
protein (572aa)
Type II secretion system protein E {ECO:0000313|EMBL:KKW46833.1}; TaxID=1618888 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_56_8.;"
Type II secretion system protein E
Type II secretion system protein E
GWB1_scaffold_323_13
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

12675..13880
-----------------
DNA (1206bp)
protein (402aa)
pilC; type 4 fimbrial assembly protein pilC Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
pilC; type 4 fimbrial assembly protein pilC
Type 4 fimbrial assembly protein pilC
GWB1_scaffold_323_14
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

13882..14382
-----------------
DNA (501bp)
protein (167aa)
transmembrane_regions Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
GWB1_scaffold_323_15
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

14442..15116
-----------------
DNA (675bp)
protein (225aa)
transmembrane_regions 19..41 Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
GWB1_scaffold_323_16
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

15113..16015
-----------------
DNA (903bp)
protein (301aa)
alias=gwe2_scaffold_696_63 Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
GWB1_scaffold_323_17
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

16017..16475
-----------------
DNA (459bp)
protein (153aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
GWB1_scaffold_323_18
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

16509..18014
-----------------
DNA (1506bp)
protein (502aa)
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
GWB1_scaffold_323_19
Parcubacteria bacterium GW2011_GWB1_56_8, Parcubacteria, Bacteria

Not on your lists

comp(17960..18610)
-----------------
DNA (651bp)
protein (217aa)
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:KKW46840.1}; TaxID=1618888 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_56_8.;"
Peptidyl-tRNA hydrolase
GWB1_scaffold_323_20
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

18629..19198
-----------------
DNA (570bp)
protein (190aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
signal peptidase I (EC:3.4.21.89)
Signal peptidase I
GWB1_scaffold_323_21
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists


19271..20521
-----------------
DNA (1251bp)
protein (417aa)
hisS1; histidyl-tRNA synthetase; K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase
GWB1_scaffold_323_22
Parcubacteria bacterium GW2011_GWB1_56_8, Parcubacteria, Bacteria

Not on your lists

20527..20964
-----------------
DNA (438bp)
protein (146aa)
Histidine triad protein {ECO:0000313|EMBL:KKW46843.1}; TaxID=1618888 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_56_8.;"
histidine triad (HIT) protein
Histidine triad protein
GWB1_scaffold_323_23
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

21186..21632
-----------------
DNA (447bp)
protein (149aa)
hypothetical protein; K09117 hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
hypothetical protein
Putative uncharacterized protein
GWB1_scaffold_323_24
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

21629..22087
-----------------
DNA (459bp)
protein (153aa)
Probable rRNA maturation factor
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
GWB1_scaffold_323_25
Parcubacteria bacterium GW2011_GWB1_56_8, Parcubacteria, Bacteria

Not on your lists

22092..23318
-----------------
DNA (1227bp)
protein (409aa)
Cell division protein ftsA {ECO:0000313|EMBL:KKW46846.1}; TaxID=1618888 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_56_8.;"
cell division protein FtsA
Cell division protein ftsA
GWB1_scaffold_323_26
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

23325..24542
-----------------
DNA (1218bp)
protein (406aa)
cell division protein ftsz; K03531 cell division protein FtsZ Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
ftsZ; Cell division protein ftsZ
Cell division protein ftsZ (Fragment)
GWB1_scaffold_323_27
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

comp(24539..25471)
-----------------
DNA (933bp)
protein (311aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
hypothetical protein
Putative uncharacterized protein
GWB1_scaffold_323_28
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

comp(25646..26368)
-----------------
DNA (723bp)
protein (241aa)
oxidoreductase FAD/NAD(P)-binding Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
oxidoreductase FAD/NAD(P)-binding family protein
Flavodoxin reductase family protein
GWB1_scaffold_323_29
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

comp(26377..26694)
-----------------
DNA (318bp)
protein (106aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
hypothetical protein
Membrane protein-like protein
GWB1_scaffold_323_30
Parcubacteria bacterium GW2011_GWB1_56_8, Parcubacteria, Bacteria

Not on your lists

26816..27070
-----------------
DNA (255bp)
protein (85aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW46851.1}; TaxID=1618888 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_56_8.;"
Displaying items 1-30 of 68 in total

View Taxonomy