ggKbase home page

ERMGT100_2_curated_scaffold_9

Search features with annotation key words

Displaying items 121-150 of 221 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_9_121
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

158789..159703
-----------------
DNA (915bp)
protein (305aa)
rocF; arginase (EC:3.5.3.1)
Arginase n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F9P6_ACIC5 id=5224631 bin=16ft_combo_ws3_JS1 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_122
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(159883..160425)
-----------------
DNA (543bp)
protein (181aa)
acetyltransferase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C40F6
acetyltransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ERMGT100_2_curated_scaffold_9_123
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160422..161141)
-----------------
DNA (720bp)
protein (240aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SNA0_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KIG12035.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
hypothetical protein
ERMGT100_2_curated_scaffold_9_124
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(161138..162835)
-----------------
DNA (1698bp)
protein (566aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IJC5_KORVE id=5224633 bin=16ft_combo_ws3_JS1 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_125
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(162823..164817)
-----------------
DNA (1995bp)
protein (665aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8Q1_SPHTD id=5224635 bin=16ft_combo_ws3_JS1 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
peptidase S9 prolyl oligopeptidase active site domain-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_126
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(164920..165267)
-----------------
DNA (348bp)
protein (116aa)
alias=16ft_combo_ws3_scaffold_2718_15 id=24459538 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_127
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

165456..166736
-----------------
DNA (1281bp)
protein (427aa)
Glycosyl transferase, UDP-glucuronosyltransferase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DJK2_SINAD
UDP-glucuronosyltransferase
Glycosyl transferase, UDP-glucuronosyltransferase {ECO:0000313|EMBL:AGA28841.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
ERMGT100_2_curated_scaffold_9_128
unknown

Not on your lists

166838..167653
-----------------
DNA (816bp)
protein (272aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_9_129
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(167843..168964)
-----------------
DNA (1122bp)
protein (374aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=2 Tax=Chloroflexus RepID=A9WFF1_CHLAA id=5224366 bin=16ft_combo_ws3_JS1 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
glucuronoarabinoxylan endo-1,4-beta-xylanase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_130
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(168961..169944)
-----------------
DNA (984bp)
protein (328aa)
alias=16ft_combo_ws3_scaffold_8929_12 id=24524028 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_131
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(170268..171923)
-----------------
DNA (1656bp)
protein (552aa)
Glycosyl transferase, family 39 n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQC0_9FIRM id=5224641 bin=16ft_combo_ws3_JS1 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_132
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

comp(171972..172376)
-----------------
DNA (405bp)
protein (135aa)
DoxX family protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J617_CYCMS id=5224643 bin=16ft_combo_ws3_JS1 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=BJP_IG2158_Zixibacteria_48_33
ERMGT100_2_curated_scaffold_9_133
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

172595..174556
-----------------
DNA (1962bp)
protein (654aa)
hypothetical protein id=24533542 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_134
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

174553..176016
-----------------
DNA (1464bp)
protein (488aa)
hypothetical protein id=24533543 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_135
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(176152..176610)
-----------------
DNA (459bp)
protein (153aa)
Predicted protein id=24533544 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Nematostella vectensis genus=Nematostella taxon_order=Actiniaria taxon_class=Anthozoa phylum=Cnidaria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_136
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(176810..177175)
-----------------
DNA (366bp)
protein (122aa)
Blue (Type 1) copper domain protein id=2881549 bin=GWA1_Deltaproteobacteria_52_35 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
putative Cupredoxin
Tax=GWA1_Bdellovibrionales_52_35_curated
ERMGT100_2_curated_scaffold_9_137
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(177237..177758)
-----------------
DNA (522bp)
protein (174aa)
Iron (Metal) dependent repressor, DtxR family n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RG02_ARCPA id=5223353 bin=16ft_combo_ws3_JS1 species=Archaeoglobus profundus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
iron-dependent repressor
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
ERMGT100_2_curated_scaffold_9_138
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(178058..178576)
-----------------
DNA (519bp)
protein (173aa)
DinB family protein id=24575388 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_139
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(178660..180507)
-----------------
DNA (1848bp)
protein (616aa)
ATPase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZA08_MELRP id=5223508 bin=16ft_combo_ws3_JS1 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ATPase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_140
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

180612..182663
-----------------
DNA (2052bp)
protein (684aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XP16_9BACT
hypothetical membrane protein
Tax=RBG_16_Zixibacteria_53_22_curated
ERMGT100_2_curated_scaffold_9_141
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

182710..184701
-----------------
DNA (1992bp)
protein (664aa)
id=5223879 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_142
unknown

Not on your lists

185427..187418
-----------------
DNA (1992bp)
protein (664aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_9_143
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

187430..188950
-----------------
DNA (1521bp)
protein (507aa)
m6 family metalloprotease domain protein id=7201090 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein
Tax=RIFOXYC12_FULL_TA06_54_24_curated
ERMGT100_2_curated_scaffold_9_144
unknown

Not on your lists

188962..191409
-----------------
DNA (2448bp)
protein (816aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_9_145
unknown

Not on your lists

191713..191889
-----------------
DNA (177bp)
protein (59aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_9_146

Not on your lists

191892..192383
-----------------
DNA (492bp)
protein (164aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium 213 RepID=E3T6X5_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ADC36069.1}; TaxID=698383 species="Bacteria; environmental samples.;" source="uncultured bacterium 213.;"
ERMGT100_2_curated_scaffold_9_147
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(192328..193950)
-----------------
DNA (1623bp)
protein (541aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UPI3_ROSS1 id=5225472 bin=16ft_combo_ws3_JS1 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_148
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

194094..194675
-----------------
DNA (582bp)
protein (194aa)
BioY protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4Q3_THERP
BioY protein
BioY protein {ECO:0000313|EMBL:ACM06505.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
ERMGT100_2_curated_scaffold_9_149
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

194692..195552
-----------------
DNA (861bp)
protein (287aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KA54_9FIRM
3-hydroxyacyl-CoA dehydrogenase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_150
unknown

Not on your lists

195654..196232
-----------------
DNA (579bp)
protein (193aa)

This feature has no annotations

Displaying items 121-150 of 221 in total

View Taxonomy