ggKbase home page

ERMGT100_2_curated_scaffold_9

Search features with annotation key words

Displaying items 181-210 of 221 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_9_181
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

235507..236859
-----------------
DNA (1353bp)
protein (451aa)
GK21628 n=1 Tax=Drosophila willistoni RepID=B4MPC8_DROWI
infB; translation initiation factor IF-2
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_182
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(236783..237337)
-----------------
DNA (555bp)
protein (185aa)
putative peroxidase-related enzyme id=24595864 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Cesiribacter andamanensis genus=Cesiribacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
putative peroxidase-related enzyme
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
ERMGT100_2_curated_scaffold_9_183
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

237350..237868
-----------------
DNA (519bp)
protein (173aa)
id=5224511 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_184
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

238012..238626
-----------------
DNA (615bp)
protein (205aa)
manganese/iron superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] id=24595866 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
manganese/iron superoxide dismutase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_185
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

238704..239180
-----------------
DNA (477bp)
protein (159aa)
Bacterioferritin comigratory protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z7S6_MELRP id=5224509 bin=16ft_combo_ws3_JS1 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
peroxiredoxin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_186
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

239239..239841
-----------------
DNA (603bp)
protein (201aa)
Putative Peptidase S16, lon-like n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PAN4_9BACT id=5224508 bin=16ft_combo_ws3_JS1 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
putative peptidase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_187
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(239864..240964)
-----------------
DNA (1101bp)
protein (367aa)
Abortive infection protein; K07052 id=24595870 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
abortive infection protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_188
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

241003..241248
-----------------
DNA (246bp)
protein (82aa)
Molybdopterin converting factor, subunits 1/2 n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D990_MYXXD id=5224504 bin=16ft_combo_ws3_JS1 species=Myxococcus xanthus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
moaDE; molybdopterin converting factor, subunits 1/2
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_189
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

241251..241862
-----------------
DNA (612bp)
protein (204aa)
GCN5-related N-acetyltransferase id=4195300 bin=GWC2_Chloroflexi_73_18 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
N-acetyltransferase GCN5
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
ERMGT100_2_curated_scaffold_9_190
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

241855..242277
-----------------
DNA (423bp)
protein (141aa)
molybdopterin synthase subunit MoaE; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-] id=24595872 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Nitrococcus mobilis genus=Nitrococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
molybdopterin synthase subunit MoaE
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_191
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(242290..244161)
-----------------
DNA (1872bp)
protein (624aa)
hypothetical protein id=4409598 bin=GWA2_Elusi-like_A8_64_40 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Elusi-like_A8_64_40 organism_group=Elusimicrobia
hypothetical protein
Tax=CG_Arma_01
ERMGT100_2_curated_scaffold_9_192
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(244158..245168)
-----------------
DNA (1011bp)
protein (337aa)
Epoxyqueuosine reductase n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GNC1_THISH id=5224502 bin=16ft_combo_ws3_JS1 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
putative iron-sulfur cluster binding protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_193
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(245300..246244)
-----------------
DNA (945bp)
protein (315aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11JA4_MESSB id=5224501 bin=16ft_combo_ws3_JS1 species=unknown genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
FHA domain-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_194
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

246293..248098
-----------------
DNA (1806bp)
protein (602aa)
Uncharacterized protein n=1 Tax=Acyrthosiphon pisum RepID=J9JRB6_ACYPI id=5223726 bin=16ft_combo_ws3_JS1 species=Acyrthosiphon pisum genus=Acyrthosiphon taxon_order=Hemiptera taxon_class=Insecta phylum=Arthropoda tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_195
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(248075..249871)
-----------------
DNA (1797bp)
protein (599aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LLP7_SYNFM id=5225028 bin=16ft_combo_ws3_JS1 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_196
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(249891..250946)
-----------------
DNA (1056bp)
protein (352aa)
TRAP dicarboxylate transporter-DctP subunit n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LLP8_SYNFM id=5225029 bin=16ft_combo_ws3_JS1 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
TRAP dicarboxylate transporter subunit DctP
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_197
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(250943..251914)
-----------------
DNA (972bp)
protein (324aa)
Putative uncharacterized protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LLP9_SYNFM id=5225030 bin=16ft_combo_ws3_JS1 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_198
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(251914..253590)
-----------------
DNA (1677bp)
protein (559aa)
Electron transfer flavoprotein-ubiquinone oxidoreductase (ETF-QO) (ETF-ubiquinone oxidoreductase) (ETF dehydrogenase) (Electron-transferring-flavoprotein dehydrogenase) n=3 Tax=mine drainage metagenome RepID=E6PG49_9ZZZZ id=5224500 bin=16ft_combo_ws3_JS1 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
electron-transferring-flavoprotein dehydrogenase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_199
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(253613..254584)
-----------------
DNA (972bp)
protein (324aa)
trxB; NADPH-dependent thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] id=24576671 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
thioredoxin reductase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_200
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(254660..256357)
-----------------
DNA (1698bp)
protein (566aa)
Protease-like protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PBV0_9BURK id=5225158 bin=16ft_combo_ws3_JS1 species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
protease-associated PA
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_201
unknown

Not on your lists

comp(256360..256794)
-----------------
DNA (435bp)
protein (145aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_9_202
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

257073..258635
-----------------
DNA (1563bp)
protein (521aa)
Glucose/sorbosone dehydrogenase-related protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CIF9_MYXFH
glucose/sorbosone dehydrogenase-like protein
Glucose/sorbosone dehydrogenase-related protein {ECO:0000313|EMBL:AEI65025.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
ERMGT100_2_curated_scaffold_9_203
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

258974..259375
-----------------
DNA (402bp)
protein (134aa)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC16_GEMAT
protein kinase
Tax=GWC2_Gemmatimonadetes_71_10_curated
ERMGT100_2_curated_scaffold_9_204
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

259336..261282
-----------------
DNA (1947bp)
protein (649aa)
protein kinase
serine/threonine protein kinase id=17439091 bin=RBG_16_Aminicenantes_63_14 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Tax=RBG_16_Gammaproteobacteria_66_13_curated
ERMGT100_2_curated_scaffold_9_205
RBG_16_Acidobacteria_64_8_curated, Acidobacteria, Bacteria

Not on your lists

262160..262561
-----------------
DNA (402bp)
protein (134aa)
Putative uncharacterized protein n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=B3DY55_METI4 id=5224522 bin=16ft_combo_ws3_JS1 species=Methylacidiphilum infernorum genus=Methylacidiphilum taxon_order=Methylacidiphilales taxon_class=unknown phylum=Verrucomicrobia tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_Acidobacteria_64_8_curated
ERMGT100_2_curated_scaffold_9_206
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

262619..263413
-----------------
DNA (795bp)
protein (265aa)
Putative uncharacterized protein id=24483075 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_9_207
R_Chlamydiae_49_9, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

263406..264767
-----------------
DNA (1362bp)
protein (454aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI00036879A7
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Chlamydiae_49_9_curated
ERMGT100_2_curated_scaffold_9_208
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

264814..267261
-----------------
DNA (2448bp)
protein (816aa)
silP; protein SilP (EC:3.6.3.-)
Cation-transporting ATPase id=3551987 bin=GWC2_Proteo_65_14_Ab886 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
Tax=GWC2_Deltaproteobacteria_65_14_curated
ERMGT100_2_curated_scaffold_9_209
GWC2_Chloroflexi_49_37_curated, Chloroflexi, Bacteria

Not on your lists

267264..267575
-----------------
DNA (312bp)
protein (104aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00037BD599
Tax=GWC2_Chloroflexi_49_37_curated
ERMGT100_2_curated_scaffold_9_210
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(267665..268831)
-----------------
DNA (1167bp)
protein (389aa)
MacB-like periplasmic core domain protein
ABC transporter membrane protein id=1251226 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying items 181-210 of 221 in total

View Taxonomy