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ERMGT100_2_curated_scaffold_13

Search features with annotation key words

Displaying items 61-90 of 101 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_13_60
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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63720..64079
-----------------
DNA (360bp)
protein (120aa)
DGPFAETKE domain-containing protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IPQ0_ANADE
YCII-related domain protein {ECO:0000313|EMBL:GAO01536.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
DGPFAETKE domain-containing protein
ERMGT100_2_curated_scaffold_13_61
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64114..64599
-----------------
DNA (486bp)
protein (162aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IEF5_ANADE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC82963.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
ERMGT100_2_curated_scaffold_13_62
unknown

Not on your lists

64703..65026
-----------------
DNA (324bp)
protein (108aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_13_63
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

65135..66460
-----------------
DNA (1326bp)
protein (442aa)
Serine phosphatase RsbU, regulator of sigma subunit n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGV0_CHLTF
serine phosphatase RsbU
Tax=RBG_16_Chloroflexi_54_18_curated
ERMGT100_2_curated_scaffold_13_64
Streptomyces sp. NRRL F-4428, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(66487..67698)
-----------------
DNA (1212bp)
protein (404aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000379577B
Oxidoreductase {ECO:0000313|EMBL:KJK45895.1}; TaxID=1609137 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL F-4428.;"
oxidoreductase
ERMGT100_2_curated_scaffold_13_65
unknown

Not on your lists

67808..69031
-----------------
DNA (1224bp)
protein (408aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_13_66
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

69229..70221
-----------------
DNA (993bp)
protein (331aa)
FG-GAP repeat protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XVK0_9BACT
FG-GAP repeat protein {ECO:0000313|EMBL:EHO42900.1}; Flags: Precursor;; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
HAF family extracellular repeat-containing protein
ERMGT100_2_curated_scaffold_13_67
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(70254..75434)
-----------------
DNA (5181bp)
protein (1727aa)
hypothetical protein id=24490876 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_13_68
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(75561..76424)
-----------------
DNA (864bp)
protein (288aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036C964F
methylase involved in ubiquinone/menaquinone biosynthesis
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
ERMGT100_2_curated_scaffold_13_69
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76527..76913
-----------------
DNA (387bp)
protein (129aa)
ABC drug efflux pump, inner membrane subunit, DrrB family id=4035240 bin=GWC2_Methylomirabilis_70_16 species=Nitrosomonas sp. genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
multidrug ABC transporter permease
Tax=GWD2_Desulfuromonadales_54_10_curated
ERMGT100_2_curated_scaffold_13_70
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

77394..77867
-----------------
DNA (474bp)
protein (158aa)
hemolysin III family channel protein; K11068 hemolysin III id=24474971 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hemolysin III family channel protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_13_71
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

77963..79588
-----------------
DNA (1626bp)
protein (542aa)
TPR repeat protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024U4_SOLUE
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
ERMGT100_2_curated_scaffold_13_72
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(79649..80881)
-----------------
DNA (1233bp)
protein (411aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XXI8_9BACT
hypothetical protein
Tax=RBG_13_Actinobacteria_63_9_curated
ERMGT100_2_curated_scaffold_13_73
R_WOR_2_50_17, WOR-2, Bacteria

Not on your lists

81375..82496
-----------------
DNA (1122bp)
protein (374aa)
Uncharacterized protein id=4987446 bin=GWA2_OP3_53_43 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_50_17_curated
ERMGT100_2_curated_scaffold_13_74
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

82462..82986
-----------------
DNA (525bp)
protein (175aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88462.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ERMGT100_2_curated_scaffold_13_75
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82992..86102
-----------------
DNA (3111bp)
protein (1037aa)
PAS domain S-box n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C514_DESTA
PAS domain S-box
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
ERMGT100_2_curated_scaffold_13_76
unknown

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86284..86562
-----------------
DNA (279bp)
protein (93aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_13_77
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86615..87820
-----------------
DNA (1206bp)
protein (402aa)
Type I phosphodiesterase/nucleotide n=1 Tax=Nocardioides sp. CF8 RepID=R7Y047_9ACTO
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_65_10_curated
ERMGT100_2_curated_scaffold_13_78
unknown

Not on your lists

87883..88557
-----------------
DNA (675bp)
protein (225aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_13_79
unknown

Not on your lists

88614..89252
-----------------
DNA (639bp)
protein (213aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_13_80
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

89319..91562
-----------------
DNA (2244bp)
protein (748aa)
Discoidin domain protein n=1 Tax=Patulibacter sp. I11 RepID=H0E870_9ACTN id=5225488 bin=16ft_combo_ws3_JS1 species=Patulibacter medicamentivorans genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_13_81
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91685..92272
-----------------
DNA (588bp)
protein (196aa)
Sugar-specific transcriptional regulator TrmB n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DDF2_SINAD
Sugar-specific transcriptional regulator TrmB
Putative transcriptional regulator {ECO:0000313|EMBL:EYF07287.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
ERMGT100_2_curated_scaffold_13_82
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92285..93109
-----------------
DNA (825bp)
protein (275aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G1D9_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN92500.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
ERMGT100_2_curated_scaffold_13_83
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

93221..94474
-----------------
DNA (1254bp)
protein (418aa)
id=5223382 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_13_84
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

94512..95765
-----------------
DNA (1254bp)
protein (418aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Geobacter sp. (strain M21) RepID=C6E6V4_GEOSM id=5223381 bin=16ft_combo_ws3_JS1 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_13_85
RBG_13_Aminicenantes_63_10_curated, Aminicenantes, Bacteria

Not on your lists

95762..96919
-----------------
DNA (1158bp)
protein (386aa)
Outer membrane protein/protective antigen OMA87 n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NT03_9BACT
outer membrane protein/protective antigen OMA87
Tax=RBG_13_Aminicenantes_63_10_curated
ERMGT100_2_curated_scaffold_13_86
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

97007..97516
-----------------
DNA (510bp)
protein (170aa)
Uncharacterized protein n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8L6U5_9CYAN
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMGT100_2_curated_scaffold_13_87
CSP1_5_NC10, NC10, Bacteria

Not on your lists

97513..98991
-----------------
DNA (1479bp)
protein (493aa)
putative FAD-binding protein id=14430746 bin=bin3_NC10 species=Rheinheimera perlucida genus=Rheinheimera taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=CSP1_5_NC10
ERMGT100_2_curated_scaffold_13_88
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

99039..100847
-----------------
DNA (1809bp)
protein (603aa)
Putative hydrolase, CocE/NonD family n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8L4G0_9CYAN
X-Pro dipeptidyl-peptidase domain-containing protein
X-Pro dipeptidyl-peptidase domain protein {ECO:0000313|EMBL:ABW12636.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
ERMGT100_2_curated_scaffold_13_89
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

100844..102301
-----------------
DNA (1458bp)
protein (486aa)
Esterase/lipase/thioesterase family active site n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BUG6_9GAMM
Esterase/lipase/thioesterase family active site {ECO:0000313|EMBL:EAR20680.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
esterase/lipase/thioesterase family protein
Displaying items 61-90 of 101 in total

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