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ERMGT100_2_curated_scaffold_13

Search features with annotation key words

Displaying items 1-30 of 101 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_13_1
unknown

Not on your lists

2..82
-----------------
DNA (81bp)
protein (27aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_13_2

Not on your lists

79..759
-----------------
DNA (681bp)
protein (227aa)
Marine sediment metagenome DNA, contig: S01H1_S22059 {ECO:0000313|EMBL:GAG19425.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Two component regulator propeller domain protein id=4185436 bin=GWA2_Ignavibacteria-rel_35_8 species=Desulfatibacillum alkenivorans genus=Desulfatibacillum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein
ERMGT100_2_curated_scaffold_13_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(863..1759)
-----------------
DNA (897bp)
protein (299aa)
DNA repair photolyase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q117_9FIRM id=5225484 bin=16ft_combo_ws3_JS1 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_13_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(1841..2572)
-----------------
DNA (732bp)
protein (244aa)
undecaprenyl pyrophosphate synthase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XWU3_9BACT
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ERMGT100_2_curated_scaffold_13_5
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(2588..2956)
-----------------
DNA (369bp)
protein (123aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037E491F
transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ERMGT100_2_curated_scaffold_13_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(2949..3557)
-----------------
DNA (609bp)
protein (203aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037DB688
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMGT100_2_curated_scaffold_13_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(3709..4584)
-----------------
DNA (876bp)
protein (292aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAH0_GEMAT
protein of unknown function DUF4098
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMGT100_2_curated_scaffold_13_8
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(4581..5750)
-----------------
DNA (1170bp)
protein (390aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B554FE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ERMGT100_2_curated_scaffold_13_9
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(5762..6550)
-----------------
DNA (789bp)
protein (263aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG8_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMGT100_2_curated_scaffold_13_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6547..7044)
-----------------
DNA (498bp)
protein (166aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAG7_GEMAT
RNA polymerase ECF-type sigma factor
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ERMGT100_2_curated_scaffold_13_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

7356..8411
-----------------
DNA (1056bp)
protein (352aa)
mechanosensitive ion channel MscS id=24454801 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
integral membrane protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_13_12
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

8423..9052
-----------------
DNA (630bp)
protein (210aa)
hypothetical protein n=1 Tax=Nocardiopsis baichengensis RepID=UPI00034563F2
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
ERMGT100_2_curated_scaffold_13_13
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists


comp(9142..11034)
-----------------
DNA (1893bp)
protein (631aa)
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=2 Tax=Rhodothermus marinus RepID=D0MEK0_RHOM4 id=5223896 bin=16ft_combo_ws3_JS1 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_13_14
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists


comp(11031..12302)
-----------------
DNA (1272bp)
protein (424aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PYE7_9FIRM id=5223897 bin=16ft_combo_ws3_JS1 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_13_15
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(12299..12679)
-----------------
DNA (381bp)
protein (127aa)
hypothetical protein id=24486072 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_13_16
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

Not on your lists

comp(12747..14783)
-----------------
DNA (2037bp)
protein (679aa)
Glycosyl hydrolase, family 20, catalytic domain protein id=4940684 bin=GWC2_Ignavibacteria_56_12 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Glycoside hydrolase, family 20, catalytic core
Tax=BJP_IG2102_BRC1_58_13
ERMGT100_2_curated_scaffold_13_17
unknown

Not on your lists

comp(14807..15451)
-----------------
DNA (645bp)
protein (215aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_13_trna_1
unknown

Not on your lists

15655..15727
-----------------
DNA (73bp)
transferRNA Lys
ERMGT100_2_curated_scaffold_13_18
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16610..20116)
-----------------
DNA (3507bp)
protein (1169aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000318661A
Uncharacterized protein {ECO:0000313|EMBL:AGP40329.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
hypothetical protein
ERMGT100_2_curated_scaffold_13_19
unknown

Not on your lists

comp(20226..20432)
-----------------
DNA (207bp)
protein (69aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_13_20
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20501..20800)
-----------------
DNA (300bp)
protein (100aa)
Phage shock protein n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PCW2_CELJU
phage shock protein
Phage shock protein {ECO:0000313|EMBL:ACE83160.1}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp.; cellulosa).;"
ERMGT100_2_curated_scaffold_13_21
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

21321..21911
-----------------
DNA (591bp)
protein (197aa)
Probable GTP-binding protein EngB n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P2E4_9BACT
engB; GTP-binding protein EngB
Tax=GWA2_Elusimicrobia_69_24_curated
ERMGT100_2_curated_scaffold_13_22
Streptomyces sp. PCS3-D2, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21932..22402)
-----------------
DNA (471bp)
protein (157aa)
Putative acetyltransferase n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7CCU1_STRBB
Acetyltransferase {ECO:0000313|EMBL:EYU71086.1}; TaxID=1460244 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PCS3-D2.;"
putative acetyltransferase
ERMGT100_2_curated_scaffold_13_23
GWB2_Chloroflexi_54_36_curated, Chloroflexi, Bacteria

Not on your lists

comp(22482..23030)
-----------------
DNA (549bp)
protein (183aa)
bifunctional deaminase-reductase domain-containing protein id=2272790 bin=GWB2_Chloroflexi_54_36 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
dihydrofolate reductase
Tax=GWB2_Chloroflexi_54_36_curated
ERMGT100_2_curated_scaffold_13_24
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

23197..26319
-----------------
DNA (3123bp)
protein (1041aa)
id=5224848 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_13_25
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(26335..27246)
-----------------
DNA (912bp)
protein (304aa)
hypothetical protein; K06911 id=24497726 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Nitratireductor taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_13_26
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(27444..30242)
-----------------
DNA (2799bp)
protein (933aa)
hypothetical protein id=24475466 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_13_27
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(30464..30658)
-----------------
DNA (195bp)
protein (65aa)
membrane protein n=1 Tax=Aestuariimicrobium kwangyangense RepID=UPI0003B40732
hypothetical protein
Tax=RBG_16_RIF_CHLX_70_13_curated
ERMGT100_2_curated_scaffold_13_28
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(30664..31293)
-----------------
DNA (630bp)
protein (210aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SM90_NOCSJ
hypothetical protein
Tax=RBG_16_RIF_CHLX_70_13_curated
ERMGT100_2_curated_scaffold_13_29
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists

31384..32400
-----------------
DNA (1017bp)
protein (339aa)
Tax=RBG_16_Zixibacteria_50_21_curated
Displaying items 1-30 of 101 in total

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