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ERMGT100_2_curated_scaffold_19

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_19_1
RBG_13_RIF08_66_14_curated, RIF8, Bacteria

Not on your lists

comp(257..784)
-----------------
DNA (528bp)
protein (176aa)
DNA-binding protein n=1 Tax=Salisaeta longa RepID=UPI0003B645DB
hypothetical protein
Tax=RBG_13_RIF08_66_14_curated
ERMGT100_2_curated_scaffold_19_2
GWA1_OD1_36_15, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(816..1832)
-----------------
DNA (1017bp)
protein (339aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP97984.1}; Flags: Fragment;; TaxID=1618728 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA1_36_15.;"
Putative uncharacterized protein id=1250226 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
ERMGT100_2_curated_scaffold_19_3
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(2041..4311)
-----------------
DNA (2271bp)
protein (757aa)
Serine/threonine protein kinase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AP4_SOLUE
protein kinase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
ERMGT100_2_curated_scaffold_19_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(4325..5857)
-----------------
DNA (1533bp)
protein (511aa)
Glycogen synthase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJP6_9BACT id=5223566 bin=16ft_combo_ws3_JS1 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
glgA; glycogen synthase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_19_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(5878..6891)
-----------------
DNA (1014bp)
protein (338aa)
Galactose-1-phosphate uridylyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUV2_KORVE id=5223567 bin=16ft_combo_ws3_JS1 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
galactose-1-phosphate uridylyltransferase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_19_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(6948..8225)
-----------------
DNA (1278bp)
protein (426aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UWM0_ROSS1 id=5223568 bin=16ft_combo_ws3_JS1 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_19_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(8236..8931)
-----------------
DNA (696bp)
protein (232aa)
Atherin n=1 Tax=Mus musculus RepID=SAMD1_MOUSE id=5223569 bin=16ft_combo_ws3_JS1 species=Mus musculus genus=Mus taxon_order=Rodentia taxon_class=Mammalia phylum=Chordata tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_19_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(8928..9983)
-----------------
DNA (1056bp)
protein (352aa)
Mannose-1-phosphate guanylyltransferase n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5ENN2_CORAD id=5223570 bin=16ft_combo_ws3_JS1 species=Coraliomargarita akajimensis genus=Coraliomargarita taxon_order=Puniceicoccales taxon_class=Opitutae phylum=Verrucomicrobia tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
mannose-1-phosphate guanyltransferase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_19_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(9985..11148)
-----------------
DNA (1164bp)
protein (388aa)
Glycosyltransferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G8Z2_SORC5 id=5223575 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
group 1 glycosyl transferase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_19_10
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11288..11845)
-----------------
DNA (558bp)
protein (186aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YV41_METPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI60313.1}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
ERMGT100_2_curated_scaffold_19_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

11981..12655
-----------------
DNA (675bp)
protein (225aa)
Glycosyl transferase, family 2 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PS3_SOLUE id=5223588 bin=16ft_combo_ws3_JS1 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
glycosyl transferase family protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_19_12
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(12652..14154)
-----------------
DNA (1503bp)
protein (501aa)
id=5223609 bin=16ft_combo_ws3_JS1 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_19_13
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(14151..15155)
-----------------
DNA (1005bp)
protein (335aa)
Uncharacterized protein n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3EAC8_GEOLS id=5223611 bin=16ft_combo_ws3_JS1 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_19_14
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(15184..15552)
-----------------
DNA (369bp)
protein (123aa)
Putative uncharacterized protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WKG7_GEOS8 id=5223612 bin=16ft_combo_ws3_JS1 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_19_15
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(15573..16274)
-----------------
DNA (702bp)
protein (234aa)
Glycosyl transferase, family 2 n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RGC4_MOOTA id=5223613 bin=16ft_combo_ws3_JS1 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
family 2 glycosyl transferase
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_19_16
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(16271..17218)
-----------------
DNA (948bp)
protein (316aa)
hypothetical protein id=24456164 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_19_17
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(17244..18116)
-----------------
DNA (873bp)
protein (291aa)
hypothetical protein id=24456165 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_19_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

18146..19390
-----------------
DNA (1245bp)
protein (415aa)
LL-diaminopimelate aminotransferase n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FHI2_9EURY
aminotransferase, class I and II
Tax=GWA2_Rokubacteria_70_23_curated
ERMGT100_2_curated_scaffold_19_19
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(19380..20738)
-----------------
DNA (1359bp)
protein (453aa)
Putative enzyme n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKL0_9BACT id=5223622 bin=16ft_combo_ws3_JS1 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
peptidase M16 domain-containing protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_19_20
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(20751..22961)
-----------------
DNA (2211bp)
protein (737aa)
pnp; polyribonucleotide nucleotidyltransferase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] id=24456167 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
pnp; polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_19_21
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists


comp(23131..23400)
-----------------
DNA (270bp)
protein (90aa)
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 id=24456168 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
30S ribosomal protein S15
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_19_22
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(23521..24438)
-----------------
DNA (918bp)
protein (306aa)
Riboflavin biosynthesis protein RibF n=1 Tax=Pontibacter sp. BAB1700 RepID=J0V2W5_9BACT id=5223625 bin=16ft_combo_ws3_JS1 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
riboflavin biosynthesis protein RibF
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_19_23
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(24435..25373)
-----------------
DNA (939bp)
protein (313aa)
tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] id=24456170 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
tRNA pseudouridine synthase B
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_19_24
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(25370..25747)
-----------------
DNA (378bp)
protein (126aa)
Ribosome-binding factor A n=1 Tax=Listeria grayi DSM 20601 RepID=D7V043_LISGR id=5223627 bin=16ft_combo_ws3_JS1 species=Listeria grayi genus=Listeria taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ribosome-binding factor A
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_19_25
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(25744..26025)
-----------------
DNA (282bp)
protein (94aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DRZ4_DESRL id=5223628 bin=16ft_combo_ws3_JS1 species=Desulfotomaculum ruminis genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_19_26
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(26060..28366)
-----------------
DNA (2307bp)
protein (769aa)
Translation initiation factor IF-2 n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AH94_IGNAJ id=5223629 bin=16ft_combo_ws3_JS1 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
translation initiation factor IF-2
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_19_27
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(28353..29987)
-----------------
DNA (1635bp)
protein (545aa)
nusA; transcription elongation factor NusA; K02600 N utilization substance protein A id=24456174 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Rhodovulum sp. PH10 genus=Rhodovulum taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
nusA; transcription elongation factor NusA
Tax=RBG_16_RIF_WS3X_71_46_curated
ERMGT100_2_curated_scaffold_19_28
unknown

Not on your lists

30188..30472
-----------------
DNA (285bp)
protein (95aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_19_29

Not on your lists

30596..31663
-----------------
DNA (1068bp)
protein (356aa)
Transposase n=1 Tax=sediment metagenome RepID=D9PLF3_9ZZZZ
Transposase {ECO:0000313|EMBL:EFK95612.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
hypothetical protein
ERMGT100_2_curated_scaffold_19_30
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(31710..32663)
-----------------
DNA (954bp)
protein (318aa)
peptidase M28 family protein id=24456176 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
peptidase M28
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying items 1-30 of 73 in total

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