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ERMGT500_2_curated_scaffold_6

Search features with annotation key words

Displaying items 1-30 of 126 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT500_2_curated_scaffold_6_1
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..279
-----------------
DNA (279bp)
protein (93aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036FBF28
chemotaxis protein
Tax=BJP_08E140C01_Dechloromonas_61_78
ERMGT500_2_curated_scaffold_6_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

282..1538
-----------------
DNA (1257bp)
protein (419aa)
methyl-accepting chemotaxis protein n=1 Tax=Variovorax paradoxus RepID=UPI00036CD101
methyl-accepting chemotaxis sensory transducer
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ERMGT500_2_curated_scaffold_6_3
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1645..2475
-----------------
DNA (831bp)
protein (277aa)
cheR2; chemotaxis protein methyltransferase (EC:2.1.1.80)
Chemotaxis protein methyltransferase {ECO:0000256|PIRNR:PIRNR000410, ECO:0000313|EMBL:CAL94072.1}; EC=2.1.1.80 {ECO:0000256|PIRNR:PIRNR000410, ECO:0000313|EMBL:CAL94072.1};; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).;"
Chemotaxis protein methyltransferase n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K5G7_AZOSB
ERMGT500_2_curated_scaffold_6_4
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2524..3144
-----------------
DNA (621bp)
protein (207aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000377846A
cheD2; chemoreceptor glutamine deamidase CheD
Tax=RBG_16_Betaproteobacteria_58_11_curated
ERMGT500_2_curated_scaffold_6_5
Hafnia alvei, Hafnia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3147..4193
-----------------
DNA (1047bp)
protein (349aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=1002364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Hafnia.;" source="Hafnia alvei ATCC 51873.;"
chemotaxis protein (EC:3.1.1.61)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000381A370
ERMGT500_2_curated_scaffold_6_6
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4223..6004
-----------------
DNA (1782bp)
protein (594aa)
Methyl-accepting chemotaxis protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2X6J9_DELAC
Membrane protein {ECO:0000313|EMBL:KEH12107.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
methyl-accepting chemotaxis sensory transducer
ERMGT500_2_curated_scaffold_6_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6095..6634
-----------------
DNA (540bp)
protein (180aa)
CheW protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIF2_THIDA
chemotaxis protein CheW
CheW protein {ECO:0000313|EMBL:AAZ97576.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
ERMGT500_2_curated_scaffold_6_8
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6716..8005
-----------------
DNA (1290bp)
protein (430aa)
Glutamyl-tRNA reductase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QM28_AZOSU
glutamyl-tRNA reductase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
ERMGT500_2_curated_scaffold_6_9
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8123..8899
-----------------
DNA (777bp)
protein (259aa)
Peptide chain release factor 1 n=1 Tax=Ralstonia solanacearum K60-1 RepID=H5WEF7_RALSL
prfA; peptide chain release factor RF-1
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_6_10
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8968..9801
-----------------
DNA (834bp)
protein (278aa)
hemK fam: modification methylase (EC:2.1.1.-)
Release factor glutamine methyltransferase n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82TH5_NITEU
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
ERMGT500_2_curated_scaffold_6_11
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9865..10374
-----------------
DNA (510bp)
protein (170aa)
id=1938459 bin=GWD2_Nitrospirae-related_57_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
ERMGT500_2_curated_scaffold_6_12
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10367..10564
-----------------
DNA (198bp)
protein (66aa)
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_6_13
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10627..10950
-----------------
DNA (324bp)
protein (108aa)
Glutaredoxin n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QM25_AZOSU
monothiol glutaredoxin
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
ERMGT500_2_curated_scaffold_6_14
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10961..11845)
-----------------
DNA (885bp)
protein (295aa)
hypothetical protein id=12495904 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Fructosamine/Ketosamine-3-kinase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
ERMGT500_2_curated_scaffold_6_15
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11884..13155)
-----------------
DNA (1272bp)
protein (424aa)
Serine/threonine protein kinase n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QLK6_AZOSU
serine/threonine protein kinase
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_6_16
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13230..14627)
-----------------
DNA (1398bp)
protein (466aa)
Argininosuccinate lyase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=ARLY_AROAE
argininosuccinate lyase
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_6_17
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14687..15712
-----------------
DNA (1026bp)
protein (342aa)
Putative alginate biosynthesis protein AlgZ/FimS n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K452_AZOSB
algZ; putative alginate biosynthesis protein AlgZ/FimS
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_6_18
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15709..16464
-----------------
DNA (756bp)
protein (252aa)
transcriptional regulator n=1 Tax=Azoarcus toluclasticus RepID=UPI0003683F05
LytTR family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
ERMGT500_2_curated_scaffold_6_19
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16515..17390
-----------------
DNA (876bp)
protein (292aa)
hemC; porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1LJQ4_RALME
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_6_20
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17387..18160
-----------------
DNA (774bp)
protein (258aa)
uroporphyrinogen-III synthase (EC:4.2.1.75)
Uroporphyrinogen-III synthase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y5J5_NITMU
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
ERMGT500_2_curated_scaffold_6_21
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18246..19217
-----------------
DNA (972bp)
protein (324aa)
Uroporphyrin-III C-methyltransferase HemX n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AB90_9PROT
uroporphyrin-III C-methyltransferase HemX
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_6_22
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19214..20404
-----------------
DNA (1191bp)
protein (397aa)
HemY domain protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6ANW5_9PROT
HemY domain protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_6_23
R_Betaproteobacteria_61_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20424..21416)
-----------------
DNA (993bp)
protein (331aa)
Aldo/keto reductase id=4710211 bin=GWC2_Syntrophus__56_31 species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
aldo/keto reductase
Tax=RifCSPlowO2_12_Betaproteobacteria_61_14_curated
ERMGT500_2_curated_scaffold_6_24
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21437..22342)
-----------------
DNA (906bp)
protein (302aa)
hemF; coproporphyrinogen III oxidase (EC:1.3.3.3)
Coproporphyrinogen-III oxidase, aerobic n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=HEM6_NITEU
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT500_2_curated_scaffold_6_25
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22339..23613)
-----------------
DNA (1275bp)
protein (425aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Thauera sp. 63 RepID=N6Y2P6_9RHOO
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
ERMGT500_2_curated_scaffold_6_26
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23630..25195)
-----------------
DNA (1566bp)
protein (522aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:3.5.4.10)
Bifunctional purine biosynthesis protein PurH id=1993488 bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_6_27
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25278..25517)
-----------------
DNA (240bp)
protein (80aa)
Putative fis-like DNA-binding protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K9K4_AZOSB
putative fis-like DNA-binding protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_6_28
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25514..26524)
-----------------
DNA (1011bp)
protein (337aa)
tRNA-dihydrouridine synthase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCT1_NITMU
dihydrouridine synthase TIM-barrel protein nifR3
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
ERMGT500_2_curated_scaffold_6_29
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26587..27711)
-----------------
DNA (1125bp)
protein (375aa)
2-octaprenyl-6-methoxyphenol hydroxylase,FAD/NAD(P)-binding n=1 Tax=mine drainage metagenome RepID=E6QNH7_9ZZZZ
UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_6_30
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27704..29077)
-----------------
DNA (1374bp)
protein (458aa)
Peptidase M24 n=1 Tax=Methylovorus sp. (strain MP688) RepID=E4QJD3_METS6
pepP; peptidase m24
Tax=RBG_16_Betaproteobacteria_64_18_curated
Displaying items 1-30 of 126 in total

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