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ERMGT500_2_curated_scaffold_207

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT500_2_curated_scaffold_207_1
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..124)
-----------------
DNA (123bp)
protein (41aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Translation elongation factor Tu (Fragment) n=2 Tax=root RepID=T1C6Q1_9ZZZZ
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
ERMGT500_2_curated_scaffold_207_2
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(253..2370)
-----------------
DNA (2118bp)
protein (706aa)
Elongation factor G n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHB0_9PROT
translation elongation factor G
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_207_3
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2468..2938)
-----------------
DNA (471bp)
protein (157aa)
30S ribosomal protein S7 n=2 Tax=Pseudogulbenkiania RepID=G2IW41_PSEUL
30S ribosomal protein S7
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_207_4
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3025..3402)
-----------------
DNA (378bp)
protein (126aa)
30S ribosomal protein S12 n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CP60_SIDLE
30S ribosomal protein S12
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_207_5
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3607..7848)
-----------------
DNA (4242bp)
protein (1414aa)
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=RPOC_NITMU
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_207_6
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7911..11990)
-----------------
DNA (4080bp)
protein (1360aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFH7_9PROT
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_207_7
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12146..12529)
-----------------
DNA (384bp)
protein (128aa)
50S ribosomal protein L7/L12 n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=RL7_NITMU
rplL; 50S ribosomal protein L7/L12
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_207_8
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12591..13121)
-----------------
DNA (531bp)
protein (177aa)
50S ribosomal protein L10 n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AB93_9PROT
rplJ; 50S ribosomal protein L10
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_207_9
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13487..14176)
-----------------
DNA (690bp)
protein (230aa)
50S ribosomal protein L1 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DR80_9PROT
rplA; 50S ribosomal protein L1
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_207_10
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14177..14608)
-----------------
DNA (432bp)
protein (144aa)
50S ribosomal protein L11 n=2 Tax=Betaproteobacteria RepID=RL11_POLSQ
rplK; ribosomal protein L11
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_207_11
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14768..15301)
-----------------
DNA (534bp)
protein (178aa)
Transcription termination/antitermination protein NusG n=1 Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GKZ7_NITSI
NusG antitermination factor
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_207_12
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15301..15645)
-----------------
DNA (345bp)
protein (115aa)
Protein translocase subunit SecE n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1KB40_AZOSB
secE; preprotein translocase subunit SecE
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_207_trna_4
unknown

Not on your lists

comp(15676..15748)
-----------------
DNA (73bp)
transferRNA Trp
ERMGT500_2_curated_scaffold_207_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15779..16969)
-----------------
DNA (1191bp)
protein (397aa)
Elongation factor Tu n=1 Tax=Sulfuricella denitrificans skB26 RepID=K6V8W5_9PROT
tufA; elongation factor Tu
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
ERMGT500_2_curated_scaffold_207_trna_3
unknown

Not on your lists

comp(17158..17229)
-----------------
DNA (72bp)
transferRNA Thr
ERMGT500_2_curated_scaffold_207_trna_2
unknown

Not on your lists

comp(17312..17382)
-----------------
DNA (71bp)
transferRNA Gly
ERMGT500_2_curated_scaffold_207_trna_1
unknown

Not on your lists

comp(17437..17520)
-----------------
DNA (84bp)
transferRNA Tyr
ERMGT500_2_curated_scaffold_207_14
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17704..18429)
-----------------
DNA (726bp)
protein (242aa)
short-chain dehydrogenase/reductase SDR (EC:1.1.1.100)
short-chain dehydrogenase n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI0003100C14
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_207_15
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18577..19284
-----------------
DNA (708bp)
protein (236aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7C0L7_9GAMM
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_207_16
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19392..20360
-----------------
DNA (969bp)
protein (323aa)
Tricarboxylate binding receptor n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SV63_JANMA
tctC4; tricarboxylate binding receptor
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
ERMGT500_2_curated_scaffold_207_17
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20421..21791)
-----------------
DNA (1371bp)
protein (457aa)
Sodium/sulfate symporter n=1 Tax=Oceanibaculum indicum P24 RepID=K2JLA8_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_207_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21879..22640)
-----------------
DNA (762bp)
protein (254aa)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC:4.1.2.52)
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase n=1 Tax=Thauera sp. 63 RepID=N6Y7Q7_9RHOO
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMGT500_2_curated_scaffold_207_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22738..24471)
-----------------
DNA (1734bp)
protein (578aa)
dehydratase (EC:4.2.1.-)
Dihydroxy-acid dehydratase n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F411_9BURK
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMGT500_2_curated_scaffold_207_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24484..25452)
-----------------
DNA (969bp)
protein (323aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002EB3DDD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
ERMGT500_2_curated_scaffold_207_21
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25551..27356)
-----------------
DNA (1806bp)
protein (602aa)
Thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I2Y1_9BRAD
acetolactate synthase large subunit
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_207_22
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27484..28473)
-----------------
DNA (990bp)
protein (330aa)
Uncharacterized protein n=1 Tax=Ralstonia sp. PBA RepID=I9W8U2_9RALS
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
ERMGT500_2_curated_scaffold_207_23
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28624..29949
-----------------
DNA (1326bp)
protein (442aa)
Uncharacterized protein n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4T7U9_9RHIZ
sigma-70 region 3 domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
ERMGT500_2_curated_scaffold_207_24
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30101..30910)
-----------------
DNA (810bp)
protein (270aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTA0_ACIC1
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABK52660.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
ERMGT500_2_curated_scaffold_207_25
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30886..31728)
-----------------
DNA (843bp)
protein (281aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LT99_ACIC1
binding-protein-dependent transport system inner membrane protein
Tax=RBG_16_Betaproteobacteria_64_18_curated
ERMGT500_2_curated_scaffold_207_26
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31725..32789)
-----------------
DNA (1065bp)
protein (355aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTA2_ACIC1
nitrate/sulfonate/bicarbonate ABC transporter periplasmic components-like protein
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein {ECO:0000313|EMBL:ABK52662.1}; Flags: Precursor;; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
Displaying items 1-30 of 32 in total

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