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ERMGT828_2_curated_scaffold_56

Search features with annotation key words

Displaying items 31-60 of 225 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT828_2_curated_scaffold_56_31
Sulfolobus islandicus, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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comp(29024..29179)
-----------------
DNA (156bp)
protein (52aa)
YHS domain protein n=6 Tax=Sulfolobus islandicus RepID=C3MT78_SULIM
YHS domain-containing protein
YHS domain protein {ECO:0000313|EMBL:ADX86600.1}; TaxID=930945 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source="Sulfolobus islandicus (strain REY15A).;"
ERMGT828_2_curated_scaffold_56_32
GWC2_OD1_41_17, Magasanikbacteria, Parcubacteria, Bacteria

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comp(29238..29852)
-----------------
DNA (615bp)
protein (205aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR99602.1}; TaxID=1619048 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWC2_41_17.;"
hypothetical protein id=5801468 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
ErfK/YbiS/YcfS/YnhG family protein
ERMGT828_2_curated_scaffold_56_33

Not on your lists

comp(29849..32440)
-----------------
DNA (2592bp)
protein (864aa)
nve:NEMVE_v1g240852 hypothetical protein ; K08776 puromycin-sensitive aminopeptidase [EC:3.4.11.-] id=35679 bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:KKT60897.1}; TaxID=1618913 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_44_26.;"
hypothetical protein
ERMGT828_2_curated_scaffold_56_34
R_SM2F11_46_11, SM2F11, Bacteria

Not on your lists


comp(32473..33015)
-----------------
DNA (543bp)
protein (181aa)
Ham1 family protein id=2351122 bin=GWD1_TM7_39_7 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
putative deoxyribonucleotide triphosphate pyrophosphatase
Tax=RIFCSPHIGHO2_02_FULL_SM2F11_46_11_curated
ERMGT828_2_curated_scaffold_56_35
unknown

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comp(33107..33415)
-----------------
DNA (309bp)
protein (103aa)

This feature has no annotations

ERMGT828_2_curated_scaffold_56_36
RHI_SM2F11_48_16, SM2F11, Bacteria

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comp(33441..36164)
-----------------
DNA (2724bp)
protein (908aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000362505B
Preprotein translocase subunit SecA
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
ERMGT828_2_curated_scaffold_56_37
unknown

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36347..36550
-----------------
DNA (204bp)
protein (68aa)

This feature has no annotations

ERMGT828_2_curated_scaffold_56_38
unknown

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36685..36912
-----------------
DNA (228bp)
protein (76aa)

This feature has no annotations

ERMGT828_2_curated_scaffold_56_39
R_OD1_Uhrbacteria_48_12, Uhrbacteria, Parcubacteria, Bacteria

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37435..37728
-----------------
DNA (294bp)
protein (98aa)
Trp repressor; K03720 TrpR family transcriptional regulator, trp operon repressor id=5095888 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
Trp repressor
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_48_12_curated
ERMGT828_2_curated_scaffold_56_40
unknown

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comp(37761..38132)
-----------------
DNA (372bp)
protein (124aa)

This feature has no annotations

ERMGT828_2_curated_scaffold_56_41
unknown

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comp(38380..38652)
-----------------
DNA (273bp)
protein (91aa)

This feature has no annotations

ERMGT828_2_curated_scaffold_56_42
R_SM2F11_46_24, SM2F11, Bacteria

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comp(38912..39232)
-----------------
DNA (321bp)
protein (107aa)
Ribosomal subunit interface protein n=1 Tax=Geobacillus thermodenitrificans (strain NG80-2) RepID=A4ISU0_GEOTN
ribosomal subunit interface protein
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_24_curated
ERMGT828_2_curated_scaffold_56_43
unknown

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comp(39238..39348)
-----------------
DNA (111bp)
protein (37aa)

This feature has no annotations

ERMGT828_2_curated_scaffold_56_44
bacterium UASB270, Bacteria

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comp(39387..40502)
-----------------
DNA (1116bp)
protein (372aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
UDP-N-acetylenolpyruvoylglucosamine reductase; K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] id=5803034 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
UDP-N-acetylenolpyruvoylglucosamine reductase
ERMGT828_2_curated_scaffold_56_45
R_OP11_Amesbacteria_48_32, Amesbacteria, Microgenomates, Bacteria

Not on your lists

comp(40504..41955)
-----------------
DNA (1452bp)
protein (484aa)
UDP-N-acetylmuramate--L-alanine ligase n=2 Tax=Clostridium acetobutylicum RepID=MURC_CLOAB
murC; UDP-N-acetylmuramate--L-alanine ligase
Tax=RIFCSPHIGHO2_01_FULL_OP11_Amesbacteria_48_32_curated
ERMGT828_2_curated_scaffold_56_46
R_SM2F11_46_14, SM2F11, Bacteria

Not on your lists

comp(41960..42952)
-----------------
DNA (993bp)
protein (331aa)
Phospholipase family protein n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3ADP0_CARHZ
phospholipase
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_14_curated
ERMGT828_2_curated_scaffold_56_47
R_OD1_Yanofskybacteria_44_17, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(42945..44039)
-----------------
DNA (1095bp)
protein (365aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase id=2169484 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_17_curated
ERMGT828_2_curated_scaffold_56_48
R_SM2F11_46_14, SM2F11, Bacteria

Not on your lists

comp(44036..45220)
-----------------
DNA (1185bp)
protein (395aa)
group 1 glycosyl transferase id=5095922 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
group 1 glycosyl transferase
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_14_curated
ERMGT828_2_curated_scaffold_56_49
GWA2_OD1_41_14_partial, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(45222..46376)
-----------------
DNA (1155bp)
protein (385aa)
Glycosyl transferase group 1 n=1 Tax=uncultured bacterium RepID=K1Z2M1_9BACT
Glycosyl transferase group 1 {ECO:0000313|EMBL:KKR91321.1}; TaxID=1618635 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Falkowbacteria) bacterium GW2011_GWA2_41_14.;"
group 1 glycosyl transferase
ERMGT828_2_curated_scaffold_56_50
R_SM2F11_52_17, SM2F11, Bacteria

Not on your lists

comp(46369..47442)
-----------------
DNA (1074bp)
protein (358aa)
group 1 glycosyl transferase id=15189493 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
group 1 glycosyl transferase
Tax=RIFCSPHIGHO2_01_SM2F11_52_17_curated
ERMGT828_2_curated_scaffold_56_51
R_SM2F11_50_11, SM2F11, Bacteria

Not on your lists

comp(47526..48980)
-----------------
DNA (1455bp)
protein (485aa)
UDP-phosphate glucose phosphotransferase (EC:2.7.8.-)
Undecaprenyl-phosphate glucose phosphotransferase n=1 Tax=uncultured bacterium RepID=K1ZJM2_9BACT
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_50_11_curated
ERMGT828_2_curated_scaffold_56_52
R_SM2F11_46_11, SM2F11, Bacteria

Not on your lists


comp(49517..50098)
-----------------
DNA (582bp)
protein (194aa)
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 id=5096415 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
30S ribosomal protein S9
Tax=RIFCSPHIGHO2_02_FULL_SM2F11_46_11_curated
ERMGT828_2_curated_scaffold_56_53
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists


comp(50153..50575)
-----------------
DNA (423bp)
protein (141aa)
50S ribosomal protein L13 n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GR79_FILAD
50S ribosomal protein L13
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
ERMGT828_2_curated_scaffold_56_54
R_SM2F11_43_13b, SM2F11, Bacteria

Not on your lists


comp(50628..50972)
-----------------
DNA (345bp)
protein (115aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00036FABF8
50S ribosomal protein L17
Tax=RIFCSPHIGHO2_02_FULL_SM2F11_43_13b_curated
ERMGT828_2_curated_scaffold_56_55
R_SM2F11_43_13b, SM2F11, Bacteria

Not on your lists

comp(51054..51992)
-----------------
DNA (939bp)
protein (313aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha id=2333355 bin=GWD1_TM7_39_7 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
Tax=RIFCSPHIGHO2_02_FULL_SM2F11_43_13b_curated
ERMGT828_2_curated_scaffold_56_56
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists


comp(52123..52731)
-----------------
DNA (609bp)
protein (203aa)
30S ribosomal protein S4 n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IA25_9CHLR
30S ribosomal protein S4
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
ERMGT828_2_curated_scaffold_56_57
R_SM2F11_43_13b, SM2F11, Bacteria

Not on your lists


comp(52853..53323)
-----------------
DNA (471bp)
protein (157aa)
30S ribosomal protein S11 n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AFB2_9ACTN id=83819 bin=ACD56 species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD56 organism_group=OD1-i organism_desc=OD1-i
30S ribosomal protein S11
Tax=RIFCSPHIGHO2_02_FULL_SM2F11_43_13b_curated
ERMGT828_2_curated_scaffold_56_58
R_SM2F11_46_24, SM2F11, Bacteria

Not on your lists


comp(53405..53794)
-----------------
DNA (390bp)
protein (130aa)
hypothetical protein id=5801916 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
30S ribosomal protein S13
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_24_curated
ERMGT828_2_curated_scaffold_56_59
R_SM2F11_43_13b, SM2F11, Bacteria

Not on your lists

comp(54089..54343)
-----------------
DNA (255bp)
protein (85aa)
Translation initiation factor IF-1 n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFE9_THET1
translation initiation factor IF-1
Tax=RIFCSPHIGHO2_02_FULL_SM2F11_43_13b_curated
ERMGT828_2_curated_scaffold_56_60
R_SM2F11_43_23, SM2F11, Bacteria

Not on your lists

comp(54458..56149)
-----------------
DNA (1692bp)
protein (564aa)
Putative uncharacterized protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KT03_9BACT id=96104 bin=ACD63 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_43_23_curated
Displaying items 31-60 of 225 in total

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