ggKbase home page

SCN18_25_8_15_R4_B_scaffold_117_35

Organism: SCN18_25_8_15_R4_B_Xanthomonadales_70_612

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: comp(31155..32450)

Top 3 Functional Annotations

Value Algorithm Source
Homogentisate 1,2-dioxygenase {ECO:0000256|HAMAP-Rule:MF_00334, ECO:0000256|SAAS:SAAS00015626}; Short=HGDO {ECO:0000256|HAMAP-Rule:MF_00334};; EC=1.13.11.5 {ECO:0000256|HAMAP-Rule:MF_00334, ECO:0000256|SAAS:SAAS00015614};; Homogentisate oxygenase {ECO:0000256|HAMAP-Rule:MF_00334}; Homogentisic acid oxidase {ECO:0000256|HAMAP-Rule:MF_00334}; Homogentisicase {ECO:0000256|HAMAP-Rule:MF_00334}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 433.0
  • Bit_score: 777
  • Evalue 5.90e-222
hmgA; homogentisate 1,2-dioxygenase (EC:1.13.11.5) similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 428.0
  • Bit_score: 731
  • Evalue 7.40e-209
homogentisate 1,2-dioxygenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D41640 similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 429.0
  • Bit_score: 744
  • Evalue 5.10e-212

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1296
ATGAGCATCCACAGCAACGGCTACCAGAGCGGTTTCGGCAACGAGTTCGCGAGCGAAGCGGTTCCCGGCGCGCTGCCGGTGGGGCGCAATTCGCCGCAGCGGGTGGCGCACGGGCTGTACGCCGAGCAGCTGACCGGCACCGCGTTCACCGCGCCGCGGCATGCCAACCGCCGCAGCTGGCTGTACCGCATCCGCCCGGCGGCCGTGCACGGCCGTTTCGCCCCCTTCGCGCAGCCGGCGTTCCACAACGCGTTCGGCGCCGGCGCGGTGACCCCGGAGCAGCTGCGCTGGAACCCGCTGCCGCTGCCGGAGGTGCCCACCGATTTCATCGCGGGCCTGTTCACCATGGGCGGCAACGGTGGCCCGCAGGCGGGCACTGGCGTCGGCATCCACCTGTACGCGGCCAACCGCGACATGCAGGGGCGCTTTTTCTACGACGCCGACGGCGAGCTGCTGATCGTCCCGCAGCTGGGCCGGCTGCACATCGAGACCGAGCTGGGCGTGCTGGACGTGGAGCCGCAGGAGATCGCGGTGATCCCGCGCGGCGTGCGCTTCCGCGTCGCGCTGCCGGATGGCACGGCGCGCGGCTACGTGTGCGAGAACTTCGGCGCGCTGCTGCGCCTGCCCGATCTGGGGCCGATCGGCAGCAACGGCCTGGCCAACCCGCGCGATTTCCTCACCCCGCATGCGGCCTTCGAGGACGTGGAGGGCGAGTTCGAGCTGATCGCCAAGTTCCAGGGCCACCTGTGGCGCGCGCCGATCGGCCACTCGCCGCTGGACGTGGTGGCCTGGCACGGCAACTACGCGCCCTACAAGTACGACCTGCGCCGCTTCAACACCATCGGTTCGATCAGCTACGACCATCCCGATCCGTCGATCTTCCTGGTGCTGCATTCGCCCAGCGACACCGCGGGTACCAGCAACATGGATTTCGTGATCTTCCCGCCGCGCATCCTCGCCGCGCAGGACACCTTCCGCCCGCCGTGGTTCCACCGCAACATCGCCAGCGAGTTCATGGGCCTGGTGCACGGCGCCTACGACGCCAAGGCCGACGGCTTCGTGCCCGGCGGCTGTTCGCTGCACAACTGCATGACCGGGCACGGGCCGGACGCGGCCACCTTCGAGAAGGCCAGCGCCGCCGATACCCGCACGCCGGACTACATCGAAGACACCATGGCCTTCATGTTCGAAACCCGCGCGGTAATCCGCCCCTGCGCGCAGGCGCTTGAGGCCGCGCACCGGCAGCAGGATTACCCGGATTGCTGGCACGGCCTGGGCAAGCGCTTCCCGGGCTGA
PROTEIN sequence
Length: 432
MSIHSNGYQSGFGNEFASEAVPGALPVGRNSPQRVAHGLYAEQLTGTAFTAPRHANRRSWLYRIRPAAVHGRFAPFAQPAFHNAFGAGAVTPEQLRWNPLPLPEVPTDFIAGLFTMGGNGGPQAGTGVGIHLYAANRDMQGRFFYDADGELLIVPQLGRLHIETELGVLDVEPQEIAVIPRGVRFRVALPDGTARGYVCENFGALLRLPDLGPIGSNGLANPRDFLTPHAAFEDVEGEFELIAKFQGHLWRAPIGHSPLDVVAWHGNYAPYKYDLRRFNTIGSISYDHPDPSIFLVLHSPSDTAGTSNMDFVIFPPRILAAQDTFRPPWFHRNIASEFMGLVHGAYDAKADGFVPGGCSLHNCMTGHGPDAATFEKASAADTRTPDYIEDTMAFMFETRAVIRPCAQALEAAHRQQDYPDCWHGLGKRFPG*