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SCN18_25_8_15_R4_B_scaffold_117_119

Organism: SCN18_25_8_15_R4_B_Xanthomonadales_70_612

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: comp(122364..123776)

Top 3 Functional Annotations

Value Algorithm Source
Nitrogen regulation protein NR(I) {ECO:0000313|EMBL:KGQ18343.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 468.0
  • Bit_score: 645
  • Evalue 3.80e-182
Nitrogen metabolism transcriptional regulator, NtrC, Fis Family id=2624634 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 465.0
  • Bit_score: 640
  • Evalue 8.70e-181
chemotaxis protein CheY similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 467.0
  • Bit_score: 636
  • Evalue 3.60e-180

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Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1413
ATGGCTGAGGCAGCGCAGGTCTGGATCGTGGACGACGACCGTTCGGTGCGCTTCGTGCTGGCCGCCGCGCTGGGCGAGGCCGGCTACCGCGTCACCGCGTTTTCGGATGCCGCCGAGGTGCTGGCCGCGCTGCAGGCGGGCCGCCGGCCCGACCTGCTGCTGACCGACGTGCGCATGCCCGGCGACAACGGGCTGGTGCTGCTGGACAAGCTGAAGGCCGCGCATCCGCAGCTGCCGGTGATCGTGATGTCGGCGCATACCGACATCGCCAGCACCGCCGGCGCATTCCGCGGCGGCGCGCAGGAATTTCTGTCCAAGCCCTTCGACATGGACGAAGCGGTGGCGCTGGTGCGCCGCGCGCTGCCGGAACAGGCGATCGAGCGCGTCGCCCTGCCCACGGTGGCAGTCCCCGAACCGACGCAGGCGCTGGTCGGCCAGGCACCCGCCATGCGCGCGCTGTTCCGTGCCATCGGCCGGCTGGCGCAGGTGCCGCTGTCGGTGCTGATCACCGGCGAGACCGGCACCGGCAAGGAACTGGTGGCGCGCGCGCTGCACCGCGAATCGCCGCGCGCGGGCAAGCCGTTCGTGGCCCTCAACACCGCCGCGATCCCGGCCGACTTGCTGGAATCGGAGCTGTTCGGGCACGAGGCCGGCGCCTTCACCGGCGCGACCCGGCGCCAGCCCGGGCGCTTCGAGCAGGCCGACGGCGGCACCCTGTTCCTGGACGAGATCGGCGACATGCCGGCCGCGCTGCAGACGCGCCTGCTGCGCGTGCTCGCGGAGGGCGAGTTCTTCCGGGTCGGCGGGCGTGAGCTGATCCGGGTGGACGTGCGCGTGATCGCCGCCACCCACCAGCCGCTGGAGGCGCTGGTGGAACAGGGCCGCTTCCGCGCCGACCTGCTGCACCGGCTCGACGTGGTGCGCCTGCGCCTGCCGCCGCTGCGCGAGCGGCGCGAGGACATTCCGCTGCTGGCGGCGCGCTTCCTGGAAGACGCCGCGCGCACCCTGGGGCTGCCGCCCAAGCGGCTGTCCGCCGCCGCGCTGGAGCGCCTGCGCGCGCACGCCTGGCCGGGCAACGTGCGCGAACTGGAGAACGTGTGCTGGCGGCTGGCCGCGCTGGCCCCGGGCGAGACCGTCGGGGTCGCCGATCTGGCGCAGGTCTTGCCGGCGGTCGCGGCCGCGGCGGCGGAGGACGACGATGGCTGGTCGCGCGCCCTGGGCGACTGGGCGCGGCGCGCGCTGGCGGCCGGCACCCCCGACCTGCACGCGCTGGCGCGCGAACGCTTCGACCGTGTACTGCTGGAGGCCGCGCTGGAGCTGCACCAGGGCCACCGCGGCGAGGCTGCGCAGGCACTCGGCCTGAGCCGCAATACGCTGACCCGCAAACTGGGTCCGTCACGCTTTCGGCGCTGA
PROTEIN sequence
Length: 471
MAEAAQVWIVDDDRSVRFVLAAALGEAGYRVTAFSDAAEVLAALQAGRRPDLLLTDVRMPGDNGLVLLDKLKAAHPQLPVIVMSAHTDIASTAGAFRGGAQEFLSKPFDMDEAVALVRRALPEQAIERVALPTVAVPEPTQALVGQAPAMRALFRAIGRLAQVPLSVLITGETGTGKELVARALHRESPRAGKPFVALNTAAIPADLLESELFGHEAGAFTGATRRQPGRFEQADGGTLFLDEIGDMPAALQTRLLRVLAEGEFFRVGGRELIRVDVRVIAATHQPLEALVEQGRFRADLLHRLDVVRLRLPPLRERREDIPLLAARFLEDAARTLGLPPKRLSAAALERLRAHAWPGNVRELENVCWRLAALAPGETVGVADLAQVLPAVAAAAAEDDDGWSRALGDWARRALAAGTPDLHALARERFDRVLLEAALELHQGHRGEAAQALGLSRNTLTRKLGPSRFRR*