ggKbase home page

SCN18_25_8_15_R4_B_scaffold_71_420

Organism: SCN18_25_8_15_R4_B_Xanthomonadales_70_612

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: 442359..442607

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S16 n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002F06EB2 similarity UNIREF
DB: UNIREF100
  • Identity: 77.8
  • Coverage: 81.0
  • Bit_score: 134
  • Evalue 3.50e-29
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1385517 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter daejeonensis GH1-9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.6
  • Coverage: 82.0
  • Bit_score: 145
  • Evalue 2.20e-32
rpsP; 30S ribosomal protein S16 similarity KEGG
DB: KEGG
  • Identity: 79.0
  • Coverage: 81.0
  • Bit_score: 131
  • Evalue 6.50e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_P_inoc_Xanthomonadales_63_13 → SCNpilot_P_inoc_Xanthomonadales_63_13 → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 249
ATGGTCAAGATCCGTCTTACCCGCGGTGGCGCGAAGAAGCGTCCCTTCTACCACATCATCGTCACCGACAGCCGCAGCGCCCGCGACGGTCGCAACATCGAGCGCCTGGGCTTCTACAATCCGGTGGCACAGGGTCAGGAGAAGCGCGTCGAGCTGGATCTCGAGCGTCTGAAGTACTGGGTGGACAACGGCGCCCAGCTGACCGAGAAGGTCGCCGACCTGTACAAGGCGGCCGCCAGGGCGGCTTGA
PROTEIN sequence
Length: 83
MVKIRLTRGGAKKRPFYHIIVTDSRSARDGRNIERLGFYNPVAQGQEKRVELDLERLKYWVDNGAQLTEKVADLYKAAARAA*