ggKbase home page

SCN18_25_8_15_R4_B_scaffold_71_441

Organism: SCN18_25_8_15_R4_B_Xanthomonadales_70_612

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38
Location: comp(462607..464172)

Top 3 Functional Annotations

Value Algorithm Source
Major facilitator superfamily MFS_1 n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WS13_PSEUU similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 486.0
  • Bit_score: 684
  • Evalue 5.80e-194
MFS transporter permease {ECO:0000313|EMBL:KGQ20530.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 485.0
  • Bit_score: 712
  • Evalue 2.80e-202
major facilitator superfamily protein similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 486.0
  • Bit_score: 684
  • Evalue 1.60e-194

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1566
ATGCCTGCGCTATATGTACGCAGGATGTACGCAGGCCGCGCACGGGTGGCCGGAATCGCCACCGCCATCGGGGATGCCATGCACGCTGCCATCGCAAGGGACAAACCACCGCTTTCGTTCTGGCAGATCTGGAACATGTGCTTTGGCTTTCTCGGCATCCAGTTCGGGTTCGCGCTGCAGAACGCCAACGTCAGCCGCATCTTCCAGACCCTGGGCGCGGACATGGACGCGCTGCCGGGGCTGTGGATCGCCGCGCCGCTGACGGGGCTGCTGGTGCAGCCGGTGATCGGCTATCTGTCCGACCGCACCTGGACCGGCCTCGGCCGCCGCCGCCCCTACTTCCTGGCCGGCGCCCTGCTCGCCTCGCTGGCGCTGGTGCTCATGCCGGCCTCGCCCACCCTGTGGATGGCCGCCGGCCTGCTGTGGGTGCTGGACGCCTCGATCAACGTCTCGATGGAACCCTTCCGCGCCTTCGTCGGCGACCAGCTGCCGATGTCACAGCGCGCCAAGGGCTATGCGATGCAGAGCTTCTTCATCGGCATCGGCTCGGTGATCGCCAGCCTGCTGCCGTGGCTGCTGGAGAAATGGGGCGTGGCCAACACCGCCGGGCCCGGCGAAGTGCCGGACACCGTGCGCTATGCCTTCTATGCCGGCGCAGGCGTGCTGCTGGGCGCAATCGCCTGGACGGTACTGCGCACCCGCGAATACCCGCCCGGGCAGCTTGCCGCGTTCGACCAGGCCGCTCCGTTGGACCGCACGCTGCTGGATCGCACGCGCGCCGCCCGCTTTGGCCTGCTGTGGCTGCTGCTGGGCGCGCTGGGCCTGGCCGGCGTGGCCTGGCAGGACCTGCCGCGCGAGCTGTACCTGCTGGGCGCACTGCTGGCCACCTACGGCGTGGCGCTGCTGGCGCTGTCCGTAGTCGGCCGCGACAGCGGCTTCGCCCAGGTGATGGGCGACATCTACGCCATGCCGCTGGCGATGCGGCGGCTGGCGGTGGTCCAGTTCTTCTCGTGGTTCGCGCTGTTCGCGATGTGGATCTACACTACCGCCACCGTCACCCGCGTGTATTACAGCAGCGGCGACACTGCCTCGGCCGCCTACAACACCGGCGCCAACTGGGTGGGCGTGCTGTTCGCGGCCTACAACGGCTTCGCCGCGCTGGCGGCGATCGCGATTCCGTGGATGGCGCGCCGCTTCGGCCTGCGCGGCAGCCATCTGCTCAATCTCATCCTGGGCGGGATCGGGCTGGCTTCGATTCCGTTCCTGCCCGACGCGAACTGGCTGCTGCTGTCGATGGTCGGCATCGGCATCGCCTGGGCCTCGATCCTGTCGCTGCCCTACGCGCTGCTGTCCGACAGCGTGCCGGCCGCCAAGATGGGCGTGTACATGGGCATCTTCAATTTCTTCATCGTCATCCCGCAATTGGTGGCGGTGGCCACGCTGGGCTATATCCTCAAGCACCTGTTCGCCAACGACCCGGCGAAGGTCCTGGTGCTGGGCGGTGCCAGCATGCTCGTCGCCGGGCTGTGCGCGCTGCGCGTGCCCGAACCTGCCGCCCACGCCTGA
PROTEIN sequence
Length: 522
MPALYVRRMYAGRARVAGIATAIGDAMHAAIARDKPPLSFWQIWNMCFGFLGIQFGFALQNANVSRIFQTLGADMDALPGLWIAAPLTGLLVQPVIGYLSDRTWTGLGRRRPYFLAGALLASLALVLMPASPTLWMAAGLLWVLDASINVSMEPFRAFVGDQLPMSQRAKGYAMQSFFIGIGSVIASLLPWLLEKWGVANTAGPGEVPDTVRYAFYAGAGVLLGAIAWTVLRTREYPPGQLAAFDQAAPLDRTLLDRTRAARFGLLWLLLGALGLAGVAWQDLPRELYLLGALLATYGVALLALSVVGRDSGFAQVMGDIYAMPLAMRRLAVVQFFSWFALFAMWIYTTATVTRVYYSSGDTASAAYNTGANWVGVLFAAYNGFAALAAIAIPWMARRFGLRGSHLLNLILGGIGLASIPFLPDANWLLLSMVGIGIAWASILSLPYALLSDSVPAAKMGVYMGIFNFFIVIPQLVAVATLGYILKHLFANDPAKVLVLGGASMLVAGLCALRVPEPAAHA*